RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 CATIPQ7Z7H3 387 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 STAG2Q8N3U4 1231 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 TDRD5Q8NAT2 981 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 CTCFLQ8NI51 663 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 CASP10Q92851 521 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 RRP36Q96EU6 259 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 TCF25Q9BQ70 676 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 SDF4Q9BRK5 362 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 RC3H2Q9HBD1 1191 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 ATP6V0A4Q9HBG4 840 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 SENP2Q9HC62 589 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 C1orf112Q9NSG2 853 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 FBXL21Q9UKT6 434 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 SUPT16HQ9Y5B9 1047 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 SQORQ9Y6N5 450 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 CFAP54Q96N23 3096 aa8.98□□□□□ -0.97
ECHDC1-207ENST00000430841 RIF1Q5UIP0 2472 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 FAM186AA6NE01 2351 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 IFIT3O14879 490 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 RPS6KA5O75582 802 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 GLP2RO95838 553 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 KIF5BP33176 963 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 MTHFRP42898 656 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 MGAT3Q09327 533 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 FUT2Q10981 343 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 MTMR1Q13613 665 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 WTAPQ15007 396 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 DUSP6Q16828 381 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 ANKRD54Q6NXT1 300 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 ADSSL1Q8N142 457 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 FLCNQ8NFG4 579 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 GPRASP2Q96D09 838 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 SCLT1Q96NL6 688 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 NGRNQ9NPE2 291 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 ZSWIM5Q9P217 1185 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 DBR1Q9UK59 544 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 PADI3Q9ULW8 664 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 PLXNA4Q9HCM2 1894 aa8.97□□□□□ -0.97
ECHDC1-207ENST00000430841 PROB1E7EW31 1015 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 OPLAHO14841 1288 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 BACH1O14867 736 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 GPR182O15218 404 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 SDSP20132 328 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 DNAJB1P25685 340 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 RFC5P40937 340 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 NBL1P41271 181 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 ITIH3Q06033 890 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 SMC1AQ14683 1233 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 GRM4Q14833 912 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 ASCL5Q7RTU5 278 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 FRMD5Q7Z6J6 570 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 CKAP2LQ8IYA6 745 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 NME8Q8N427 588 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 COLGALT1Q8NBJ5 622 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 ACSF2Q96CM8 615 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 ASIC4Q96FT7 647 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 ZNF558Q96NG5 402 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 DSCC1Q9BVC3 393 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 CELF4Q9BZC1 486 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 JPH1Q9HDC5 661 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 NXF1Q9UBU9 619 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 MAD2L2Q9UI95 211 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 PCDHGC5Q9Y5F6 944 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 IGSF9BQ9UPX0 1349 aa8.96□□□□□ -0.98
ECHDC1-207ENST00000430841 PPP1R11O60927 126 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 PDGFBP01127 241 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 LINC00271P0C7V0 271 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 INSRRP14616 1297 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 GATMP50440 423 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 ADAM17P78536 824 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 MRPS9P82933 396 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 TMEM266Q2M3C6 531 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 FAM160B1Q5W0V3 765 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 ELMSAN1Q6PJG2 1045 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 ZC3H14Q6PJT7 736 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 RNF19BQ6ZMZ0 732 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 SLC24A5Q71RS6 500 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 LRRC43Q8N309 656 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 RNF169Q8NCN4 708 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 SUSD6Q92537 303 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 MRPS27Q92552 414 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 MTMR8Q96EF0 704 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 ADAM2Q99965 735 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 LNPKQ9C0E8 428 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 AGO3Q9H9G7 860 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 DZANK1Q9NVP4 752 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 SLC9A2Q9UBY0 812 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 LZTS1Q9Y250 596 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 FRMPD4Q14CM0 1322 aa8.95□□□□□ -0.98
ECHDC1-207ENST00000430841 USP34Q70CQ2 3546 aa8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 SMIM35A0A1B0GVV1 85 aa8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 MBLAC1A4D2B0 266 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 CARNS1A5YM72 827 aa8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 ZSCAN20P17040 1043 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 GNAQP50148 359 aa8.94□□□□□ -0.98
ECHDC1-207ENST00000430841 APOBRQ0VD83 1088 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms