RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 ASAP2O43150 1006 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 ZNF862O60290 1169 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 MMP1P03956 469 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 SRGAP2BP0DMP2 458 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 DARSP14868 501 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 LAG3P18627 525 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 KCNA5P22460 613 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 PPM1AP35813 382 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 GPC3P51654 580 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 KCNQ1P51787 676 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 POLGP54098 1239 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 HMGN5P82970 282 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 GNL2Q13823 731 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 EPHA7Q15375 998 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 TARBP2Q15633 366 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 NPY5RQ15761 445 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 CALCRLQ16602 461 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 UGCGQ16739 394 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 ME3Q16798 604 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 PAN2Q504Q3 1202 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 B3GNT9Q6UX72 402 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 FAM228AQ86W67 206 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 CRIPAKQ8N1N5 446 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 NECAB1Q8N987 351 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 LINC01599Q8WXQ3 324 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 CEP170P1Q96L14 293 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 PPP1R16BQ96T49 567 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 C1QTNF1Q9BXJ1 281 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 MRPL9Q9BYD2 267 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 TMEM117Q9H0C3 514 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 ADAMTS10Q9H324 1103 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 CYP26B1Q9NR63 512 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 SH2B1Q9NRF2 756 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 SUCLA2Q9P2R7 463 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 PCDHA12Q9UN75 941 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 PLAGL2Q9UPG8 496 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 KIF3AQ9Y496 699 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 TTC28Q96AY4 2481 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 RALGAPA2Q2PPJ7 1873 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 TTC3P53804 2025 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 SLC37A4O43826 429 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 NEMFO60524 1076 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 RAB27AP51159 221 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 KRT17Q04695 432 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 ORC2Q13416 577 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-211ENST00000430454 PCBP1Q15365 356 aaKnown RBP eCLIP10.21□□□□□ -0.77
HDAC9-211ENST00000430454 TCEAL5Q5H9L2 206 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 NCAPH2Q6IBW4 605 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 PTCRAQ6ISU1 281 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-211ENST00000430454 RHPN2Q8IUC4 686 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 C4orf19Q8IY42 314 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 DIS3L2Q8IYB7 885 aaKnown RBP10.21□□□□□ -0.77
HDAC9-211ENST00000430454 THNSL1Q8IYQ7 743 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 LRRC43Q8N309 656 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 LINC01465Q8N7H1 131 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 FAM184AQ8NB25 1140 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 MICAL1Q8TDZ2 1067 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 TMEM40Q8WWA1 233 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 PSPC1Q8WXF1 523 aaKnown RBP10.21□□□□□ -0.77
HDAC9-211ENST00000430454 PGBD4Q96DM1 585 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 CDHR5Q9HBB8 845 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 CLDND1Q9NY35 253 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 VAV3Q9UKW4 847 aa10.21□□□□□ -0.77
HDAC9-211ENST00000430454 COL4A4P53420 1690 aaPredicted RBP10.21□□□□□ -0.78
HDAC9-211ENST00000430454 BDP1A6H8Y1 2624 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 IGKV6-21A0A0C4DH24 114 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 A0A0U1RQF3 1178 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 GRM6O15303 877 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 EDIL3O43854 480 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 REV3LO60673 3130 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 CTDNEP1O95476 244 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 YWHABP31946 246 aaKnown RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 RBM25P49756 843 aaKnown RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 TFDP1Q14186 410 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 DSC3Q14574 896 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 MXD4Q14582 209 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 XKR9Q5GH70 373 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 ANO5Q75V66 913 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 CATSPER4Q7RTX7 472 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 KLHL23Q8NBE8 558 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 RNF169Q8NCN4 708 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 NSUN7Q8NE18 718 aaKnown RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 ERMNQ8TAM6 284 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 GJA10Q969M2 543 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 C8orf76Q96K31 380 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 ZNF558Q96NG5 402 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 POP1Q99575 1024 aaKnown RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 LXNQ9BS40 222 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 TRAIPQ9BWF2 469 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 ALG13Q9NP73 1137 aaKnown RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 STK39Q9UEW8 545 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 PRKAG3Q9UGI9 489 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 NOL7Q9UMY1 257 aaKnown RBP10.2□□□□□ -0.78
HDAC9-211ENST00000430454 COL4A3BPQ9Y5P4 624 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 VCANP13611 3396 aa10.2□□□□□ -0.78
HDAC9-211ENST00000430454 ST18O60284 1047 aa10.19□□□□□ -0.78
HDAC9-211ENST00000430454 MGEA5O60502 916 aa10.19□□□□□ -0.78
HDAC9-211ENST00000430454 XRCC6P12956 609 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC9-211ENST00000430454 FDPSP14324 419 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms