RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ATAD3AQ9NVI7 634 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 KLHL14Q9P2G3 628 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF212Q9UDV6 495 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 SERTAD1Q9UHV2 236 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TMEM59LQ9UK28 342 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TSC22D4Q9Y3Q8 395 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 CD2APQ9Y5K6 639 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 PARP4Q9UKK3 1724 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 IQCA1LA6NCM1 817 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 CCDC169A6NNP5 214 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 H0Y3Z8 333 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 CYTH3O43739 400 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZBED4O75132 1171 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 NUDT17P0C025 328 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 MYL6BP14649 208 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 ARFIP2P53365 341 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 STX17P56962 302 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 RASSF7Q02833 373 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 PPARDQ03181 441 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 FOXD4Q12950 439 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 TRADDQ15628 312 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 CNGA3Q16281 694 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 SPDYAQ5MJ70 313 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 MEX3CQ5U5Q3 659 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 TMC3Q7Z5M5 1100 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 GSDMAQ96QA5 445 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 DUSP9Q99956 384 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 SELENOSQ9BQE4 189 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 IRF2BPLQ9H1B7 796 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.54□□□□□ -0.884e-7■■■■□ 22.8
CDC42BPA-206ENST00000429440 TTC7AQ9ULT0 858 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 MYH2Q9UKX2 1941 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 ARFGEF2Q9Y6D5 1785 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 SPECC1L-ADORA2AF8WAN1 911 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 PJA2O43164 708 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 AGTP01019 485 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 UBTFL6P0CB48 400 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZCCHC18P0CG32 403 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 PPIDQ08752 370 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 WDR72Q3MJ13 1102 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 KLHL35Q6PF15 583 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 PTF1AQ7RTS3 328 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 C11orf74Q86VG3 221 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 COL23A1Q86Y22 540 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 SLC7A5P1Q8MH63 180 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 MB21D1Q8N884 522 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 SLC43A3Q8NBI5 491 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 NRG4Q8WWG1 115 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 GRAMD1AQ96CP6 724 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 HGH1Q9BTY7 390 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 TBC1D10AQ9BXI6 508 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 MTFR1LQ9H019 292 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 STMN4Q9H169 189 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 AIPL1Q9NZN9 384 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 LRWD1Q9UFC0 647 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 CCPG1Q9ULG6 757 aa9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 HBS1LQ9Y450 684 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-206ENST00000429440 CES2O00748 559 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 FBP2O00757 339 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MAGEB3O15480 346 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 ENTPD5O75356 428 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 STK10O94804 968 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TMED10P49755 219 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TUBA4AP68366 448 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TBL3Q12788 808 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZBTB17Q13105 803 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 EPHA10Q5JZY3 1008 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MIGA2Q7L4E1 593 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 HS2ST1Q7LGA3 356 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 PATL1Q86TB9 770 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TTC8Q8TAM2 541 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 CLK4Q9HAZ1 481 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 PARVBQ9HBI1 364 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 STX18Q9P2W9 335 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 ATP6V0A2Q9Y487 856 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 PCDHB2Q9Y5E7 798 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 LAMB4A4D0S4 1761 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 SH3PXD2BA1X283 911 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 LGALS16A8MUM7 142 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 KCNJ18B7U540 433 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 HNRNPCL1O60812 293 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MOCS3O95396 460 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 OXSR1O95747 527 aaPredicted RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 EIF2S1P05198 315 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 CYP2C9P11712 490 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 KCNA2P16389 499 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 ATF3P18847 181 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MARK3P27448 753 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms