RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 IQCB1Q15051 598 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 PLA2G4FQ68DD2 849 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 OTOP2Q7RTS6 562 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 C4orf19Q8IY42 314 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 IGSF22Q8N9C0 903 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 ZMYND15Q9H091 742 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 CXXC1Q9P0U4 656 aaPredicted RBP12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
PABPC1P11-201ENST00000428966 BECN2A8MW95 431 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 LAD1O00515 517 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 CXCL10P02778 98 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 RFC2P35250 354 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 MGAT3Q09327 533 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 SYCP1Q15431 976 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 TCTN1Q2MV58 587 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 MTERF2Q49AM1 385 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 RASIP1Q5U651 963 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 PSRC1Q6PGN9 363 aaPredicted RBP12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 CATSPER3Q86XQ3 398 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 RPUSD2Q8IZ73 545 aaKnown RBP12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 METTL13Q8N6R0 699 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 A0A087WWV3 80 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 A0A1W2PQ27 194 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 A0A1W2PQ64 194 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 A0A1W2PQD8 194 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 CTIFO43310 598 aaKnown RBP12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 MED24O75448 989 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 FGBP02675 491 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 PFKMP08237 780 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 CDC25AP30304 524 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 PRPHP41219 470 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 CLCN3P51790 818 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 CEBPZQ03701 1054 aaKnown RBP12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 FAM26DQ5JW98 314 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 LINC01465Q8N7H1 131 aa12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
PABPC1P11-201ENST00000428966 TANC1Q9C0D5 1861 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 SMTNL1A8MU46 457 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 SOX1O00570 391 aaPredicted RBP12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 ME1P48163 572 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 DRP2Q13474 957 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 SF3A1Q15459 793 aaKnown RBP12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 RSPH3Q86UC2 560 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 CEP57L1Q8IYX8 460 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 USP28Q96RU2 1077 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 CYP26B1Q9NR63 512 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 CDY2AQ9Y6F7 541 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 SCN5AQ14524 2016 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 TET1Q8NFU7 2136 aa12.9□□□□□ -0.34
PABPC1P11-201ENST00000428966 IGKV6-21A0A0C4DH24 114 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 MAGEB2O15479 319 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 LYPLA2O95372 231 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 MRPS6P82932 125 aaKnown RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 PDIA5Q14554 519 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 ECM1Q16610 540 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 LRIT3Q3SXY7 679 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 FAM109BQ6ICB4 259 aaPredicted RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 DTHD1Q6ZMT9 781 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 NEK9Q8TD19 979 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 PIGOQ8TEQ8 1089 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 CLIC4Q9Y696 253 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 VTNP04004 478 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 GHRP10912 638 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 RPA1P27694 616 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 ZRSR1Q15695 479 aaKnown RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 GINS2Q9Y248 185 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 CHD9Q3L8U1 2897 aa12.89□□□□□ -0.35
PABPC1P11-201ENST00000428966 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms