RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RNF208Q9H0X6 261 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 POLR3FQ9H1D9 316 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 MINDY3Q9H8M7 445 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 HDAC6Q9UBN7 1215 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 LOXHD1Q8IVV2 1947 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 ADAMTS4O75173 837 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 NCAPHQ15003 741 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 XKR3Q5GH77 459 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 ANKRD40Q6AI12 368 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 RDH13Q8NBN7 331 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 AP5M1Q9H0R1 490 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 TRMT13Q9NUP7 481 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 TBCAO75347 108 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 RHOBTB3O94955 611 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM13AO94988 1023 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 EHHADHQ08426 723 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM26FQ5R3K3 315 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 MAP3K21Q5TCX8 1036 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 EFCAB12Q6NXP0 572 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 UNC13DQ70J99 1090 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 NELFBQ8WX92 580 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 GSDMAQ96QA5 445 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 PCIF1Q9H4Z3 704 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 SAGE1Q9NXZ1 904 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 ERAP1Q9NZ08 941 aa10.53□□□□□ -0.72
HMGCLL1-206ENST00000428842 LRRIQ4A6NIV6 560 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 LGR5O75473 907 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 SMC2O95347 1197 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 CTSHP09668 335 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 SMIM10L2AP0DMW4 78 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 SMIM10L2BP0DMW5 78 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 NPTX2P47972 431 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 KIZQ2M2Z5 673 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZNF658Q5TYW1 1059 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 KANK3Q6NY19 840 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 KCNV1Q6PIU1 500 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 TEX2Q8IWB9 1127 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 REM2Q8IYK8 340 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 GIMAP8Q8ND71 665 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 K7ENM7 598 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 B4GALT5O43286 388 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 GLRA2P23416 452 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 PPFIA1Q13136 1202 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 MFSD10Q14728 455 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 GRIK4Q16099 956 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 FAM160B1Q5W0V3 765 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 SCARA3Q6AZY7 606 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 TAS1R3Q7RTX0 852 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZBTB45Q96K62 511 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 DDX20Q9UHI6 824 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 NFE2L3Q9Y4A8 694 aa10.52□□□□□ -0.73
HMGCLL1-206ENST00000428842 FAM170AA1A519 330 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 C22orf31O95567 290 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 HARSP12081 509 aaKnown RBP10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 HOXD10P28358 340 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 AMPD3Q01432 767 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 IRF5Q13568 498 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 CAPSQ13938 189 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 GDF6Q6KF10 455 aaPredicted RBP10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 FAM178BQ8IXR5 827 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 ADSSL1Q8N142 457 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 DNAJB3Q8WWF6 145 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 SLC7A3Q8WY07 619 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 DHX33Q9H6R0 707 aaKnown RBP10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 ANO10Q9NW15 660 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
HMGCLL1-206ENST00000428842 GOLGA8IPA6NC78 632 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 GOLGA8JA6NMD2 632 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 LYPLA2O95372 231 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 F2P00734 622 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 CCL5P13501 91 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 CASP4P49662 377 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 RNF149Q8NC42 400 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 TMEM40Q8WWA1 233 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 CTAGE1Q96RT6 745 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 DUSP9Q99956 384 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 TRPV6Q9H1D0 765 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 CUEDC2Q9H467 287 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 HMX1Q9NP08 348 aaPredicted RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 HOOK1Q9UJC3 728 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 AKT3Q9Y243 479 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 COL6A3P12111 3177 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 EMSYQ7Z589 1322 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 A0A087WZ62 844 aa10.5□□□□□ -0.73
HMGCLL1-206ENST00000428842 ANKRD63C9JTQ0 380 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms