RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 MYO15AQ9UKN7 3530 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 WDR87Q6ZQQ6 2873 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 MAGEB2O15479 319 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 PDGFBP01127 241 aaPredicted RBP20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 CYP3A4P08684 503 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 SETQ01105 290 aaPredicted RBP20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 TPRNQ4KMQ1 711 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 ECHDC2Q86YB7 292 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 SMAP1Q8IYB5 467 aaPredicted RBP20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 KREMEN2Q8NCW0 462 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 CASP10Q92851 521 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 ZNF668Q96K58 619 aaPredicted RBP20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 IRF2BPLQ9H1B7 796 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 PCDHA10Q9Y5I2 948 aa20.74■□□□□ 0.91
UPK3BP1-201ENST00000428678 WDR81Q562E7 1941 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 KLF18A0A0U1RQI7 1052 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 TMOD1P28289 359 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 CA8P35219 290 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 SMC1AQ14683 1233 aaKnown RBP20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 CES5AQ6NT32 575 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 EFCAB12Q6NXP0 572 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 LRRC71Q8N4P6 559 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 CRYGNQ8WXF5 182 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 FAM167AQ96KS9 214 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 SCLT1Q96NL6 688 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 ADAMTS10Q9H324 1103 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 VPS13AQ96RL7 3174 aa20.73■□□□□ 0.91
UPK3BP1-201ENST00000428678 EIF4BP23588 611 aaKnown RBP20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 CDC27P30260 824 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 PRR16Q569H4 304 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 CLLU1OSQ5K130 101 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 SNX27Q96L92 541 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 RIPOR3Q96MK2 946 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 FAM217BQ9NTX9 383 aaPredicted RBP20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 HCFC2Q9Y5Z7 792 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 FAM186AA6NE01 2351 aa20.72■□□□□ 0.91
UPK3BP1-201ENST00000428678 C2orf71A6NGG8 1288 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 H0Y858 1186 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 MTMR3Q13615 1198 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 PFKFB3Q16875 520 aaPredicted RBP20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 REXO1Q8N1G1 1221 aaKnown RBP20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 SLC39A11Q8N1S5 342 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 MRPL43Q8N983 215 aaKnown RBP20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 HELQQ8TDG4 1101 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 NECTIN4Q96NY8 510 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 POMKQ9H5K3 350 aa20.71■□□□□ 0.91
UPK3BP1-201ENST00000428678 C2CD4DB7Z1M9 353 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 ADAMTS3O15072 1205 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 FGFR4P22455 802 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 ITIH3Q06033 890 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 MCTP2Q6DN12 878 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 UBALD2Q8IYN6 164 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 ZNF710Q8N1W2 664 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 LINC01465Q8N7H1 131 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 ADAM7Q9H2U9 754 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 C6orf50Q9HD87 102 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 SORCS3Q9UPU3 1222 aa20.7■□□□□ 0.9
UPK3BP1-201ENST00000428678 ESYT2A0FGR8 921 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 WDR64B1ANS9 1081 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 NT5C1B-RDH14C9J2C7 533 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 CLASP2O75122 1294 aaKnown RBP20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 BRD1O95696 1058 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 OATP04181 439 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 DARSP14868 501 aaKnown RBP20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 ADD1P35611 737 aaKnown RBP20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 GPC3P51654 580 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 FGD1P98174 961 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 PRKCEQ02156 737 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 ADCK5Q3MIX3 580 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 CCDC12Q8WUD4 166 aaPredicted RBP20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 NLRP7Q8WX94 980 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 MRPL9Q9BYD2 267 aaKnown RBP20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 ZMYND12Q9H0C1 365 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 NRBP2Q9NSY0 501 aa20.69■□□□□ 0.9
UPK3BP1-201ENST00000428678 A0A0U1RQF3 1178 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 GALR2O43603 387 aaPredicted RBP20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 ZNF862O60290 1169 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 WEE2P0C1S8 567 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 MTHFRP42898 656 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 ALDH7A1P49419 539 aaKnown RBP20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 NUBP1P53384 320 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 BCAR1P56945 870 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 BMS1Q14692 1282 aaKnown RBP20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 RARS2Q5T160 578 aaKnown RBP20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 TMEM87AQ8NBN3 555 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 TMEM169Q96HH4 297 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 DISC1Q9NRI5 854 aa20.68■□□□□ 0.9
UPK3BP1-201ENST00000428678 DMDP11532 3685 aa20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 CCDC196A0A1B0GTZ2 297 aa20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 CXCL14O95715 111 aa20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 EOMESO95936 686 aa20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 RCAN1P53805 252 aa20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 TBC1D8BQ0IIM8 1120 aa20.67■□□□□ 0.9
UPK3BP1-201ENST00000428678 ZNF598Q86UK7 904 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms