RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-216	ENST00000428482	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	FOXP1	Q9H334	677 aa	Predicted RBP	11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	TTC12	Q9H892	705 aa	Predicted RBP	11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	CYP26B1	Q9NR63	512 aa		11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	ST3GAL5	Q9UNP4	418 aa		11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	CEP131	Q9UPN4	1083 aa		11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	PCDHGC5	Q9Y5F6	944 aa		11.46	□□□□□ -0.57
HDLBP-216	ENST00000428482	TDRD15	B5MCY1	1934 aa	Known RBP	11.46	□□□□□ -0.58
HDLBP-216	ENST00000428482		A0A087WZ62	844 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	MEIS3P2	A8K0S8	358 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	ENPP3	O14638	875 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	USO1	O60763	962 aa	Known RBP	11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	EFCAB14	O75071	495 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	FGFR1	P11362	822 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	YWHAB	P31946	246 aa	Known RBP	11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	CTNNB1	P35222	781 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	PBX3	P40426	434 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	DSC3	Q14574	896 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	EPHA7	Q15375	998 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	IL17A	Q16552	155 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	IER5	Q5VY09	327 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	CRIPAK	Q8N1N5	446 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	PIGO	Q8TEQ8	1089 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	NLRP7	Q8WX94	980 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	CEP170P1	Q96L14	293 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	SCLT1	Q96NL6	688 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	NIFK	Q9BYG3	293 aa	Known RBP	11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	MINDY3	Q9H8M7	445 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	GPRC5C	Q9NQ84	441 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	MTCH2	Q9Y6C9	303 aa		11.45	□□□□□ -0.58
HDLBP-216	ENST00000428482	MARCH6	O60337	910 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	MAF	O75444	373 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	SLITRK3	O94933	977 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	EDN1	P05305	212 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	P4HB	P07237	508 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	SPATA31C1	P0DKV0	1188 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	DARS	P14868	501 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	TEC	P42680	631 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	POLG	P54098	1239 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	ERVK-21	P61565	698 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	GNL2	Q13823	731 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	SAFB	Q15424	915 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	LONRF3	Q496Y0	759 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	MCTP1	Q6DN14	999 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	FERMT3	Q86UX7	667 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	RHPN2	Q8IUC4	686 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	TPH2	Q8IWU9	490 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	C4orf32	Q8N8J7	132 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	LRRC15	Q8TF66	581 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	ZNF689	Q96CS4	500 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	TGS1	Q96RS0	853 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	ADAM2	Q99965	735 aa		11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	DHX33	Q9H6R0	707 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482	PDCD11	Q14690	1871 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-216	ENST00000428482		C9IYK1	514 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	B4GALT3	O60512	393 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	DGKI	O75912	1065 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	U2AF2	P26368	475 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-9	■■■□□ 15.4
HDLBP-216	ENST00000428482	RARRES1	P49788	294 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	CRYBB1	P53674	252 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	TFF2	Q03403	129 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	GRIN1	Q05586	938 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	CAPS	Q13938	189 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	EPC2	Q52LR7	807 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	XKR9	Q5GH70	373 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	CLLU1OS	Q5K130	101 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	FAM102B	Q5T8I3	360 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	NPAS4	Q8IUM7	802 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	C4orf19	Q8IY42	314 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	SLFN12	Q8IYM2	578 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	FBXO22	Q8NEZ5	403 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	BSND	Q8WZ55	320 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	LPP	Q93052	612 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	NAP1L4	Q99733	375 aa	Known RBP	11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	KIFC3	Q9BVG8	833 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	COL4A3BP	Q9Y5P4	624 aa		11.43	□□□□□ -0.58
HDLBP-216	ENST00000428482	DENND3	A2RUS2	1198 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	VPS37C	A5D8V6	355 aa	Predicted RBP	11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	MAGEB2	O15479	319 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	CDC25A	P30304	524 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	SARS	P49591	514 aa	Known RBP	11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	FAM173B	Q6P4H8	233 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	MAEA	Q7L5Y9	396 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	KCNK18	Q7Z418	384 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	CATSPER3	Q86XQ3	398 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	RNF169	Q8NCN4	708 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	SLC17A8	Q8NDX2	589 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	MTR	Q99707	1265 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	HSD17B14	Q9BPX1	270 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	ZSWIM4	Q9H7M6	989 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	IFT122	Q9HBG6	1241 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	POLD4	Q9HCU8	107 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	NRBP2	Q9NSY0	501 aa		11.42	□□□□□ -0.58
HDLBP-216	ENST00000428482	SMC3	Q9UQE7	1217 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms