RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KCNC3Q14003 757 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 CBX2Q14781 532 aaPredicted RBP18.71■□□□□ 0.59
VARS-216ENST00000428445 NTRK3Q16288 839 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 CLLU1OSQ5K130 101 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 SYCE2Q6PIF2 218 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 ECHDC2Q86YB7 292 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 CCDC136Q96JN2 1154 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 SLC26A6Q9BXS9 759 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 TMEM117Q9H0C3 514 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 UNC45AQ9H3U1 944 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 NCOA5Q9HCD5 579 aaKnown RBP18.71■□□□□ 0.59
VARS-216ENST00000428445 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 DISC1Q9NRI5 854 aa18.71■□□□□ 0.59
VARS-216ENST00000428445 CCDC196A0A1B0GTZ2 297 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 MAGEB2O15479 319 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 OATP04181 439 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 HMGB1P09429 215 aaKnown RBP18.7■□□□□ 0.58
VARS-216ENST00000428445 ZSCAN20P17040 1043 aaPredicted RBP18.7■□□□□ 0.58
VARS-216ENST00000428445 EIF4BP23588 611 aaKnown RBP18.7■□□□□ 0.58
VARS-216ENST00000428445 GPC3P51654 580 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 RCAN1P53805 252 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 PRKCEQ02156 737 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 LONRF3Q496Y0 759 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 ANKRD54Q6NXT1 300 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 HELQQ8TDG4 1101 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 KCNB2Q92953 911 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 LARP6Q9BRS8 491 aaKnown RBP18.7■□□□□ 0.58
VARS-216ENST00000428445 CEP131Q9UPN4 1083 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 MYO10Q9HD67 2058 aa18.7■□□□□ 0.58
VARS-216ENST00000428445 WDR64B1ANS9 1081 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 GNA11P29992 359 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 PLCB3Q01970 1234 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 KANK3Q6NY19 840 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 TMC7Q7Z402 723 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 ZNF558Q96NG5 402 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 CDCA3Q99618 268 aaPredicted RBP18.69■□□□□ 0.58
VARS-216ENST00000428445 NRBP2Q9NSY0 501 aa18.69■□□□□ 0.58
VARS-216ENST00000428445 ATF7P17544 494 aaPredicted RBP18.68■□□□□ 0.58
VARS-216ENST00000428445 RPS6KB1P23443 525 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 TMOD1P28289 359 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 HSPA4P34932 840 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 AKAP17AQ02040 695 aaKnown RBP18.68■□□□□ 0.58
VARS-216ENST00000428445 MCTP2Q6DN12 878 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 TMEM184AQ6ZMB5 413 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 BMP8AQ7Z5Y6 402 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 ABI1Q8IZP0 508 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 CCDC12Q8WUD4 166 aaPredicted RBP18.68■□□□□ 0.58
VARS-216ENST00000428445 FAM167AQ96KS9 214 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 SCLT1Q96NL6 688 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 KCNH6Q9H252 994 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 RNF216Q9NWF9 866 aaPredicted RBP18.68■□□□□ 0.58
VARS-216ENST00000428445 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
VARS-216ENST00000428445 LZTS1Q9Y250 596 aa18.68■□□□□ 0.58
VARS-216ENST00000428445 GAS7O60861 476 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 DTNBO60941 627 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 WEE2P0C1S8 567 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 DARSP14868 501 aaKnown RBP18.67■□□□□ 0.58
VARS-216ENST00000428445 PDIA3P30101 505 aaKnown RBP18.67■□□□□ 0.58
VARS-216ENST00000428445 CA8P35219 290 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 VCPP55072 806 aaKnown RBP18.67■□□□□ 0.58
VARS-216ENST00000428445 MTERF2Q49AM1 385 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 LRCH2Q5VUJ6 765 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 PDE12Q6L8Q7 609 aaKnown RBP18.67■□□□□ 0.58
VARS-216ENST00000428445 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
VARS-216ENST00000428445 ZNF598Q86UK7 904 aaKnown RBP18.67■□□□□ 0.58
VARS-216ENST00000428445 NLRP7Q8WX94 980 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 SLC5A5Q92911 643 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 LPPQ93052 612 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 SPG21Q9NZD8 308 aa18.67■□□□□ 0.58
VARS-216ENST00000428445 STBD1O95210 358 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 TDP2O95551 362 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 PDGFBP01127 241 aaPredicted RBP18.66■□□□□ 0.58
VARS-216ENST00000428445 NLRP5P59047 1200 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 KRT17Q04695 432 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 TBC1D8BQ0IIM8 1120 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 TARBP2Q15633 366 aaKnown RBP18.66■□□□□ 0.58
VARS-216ENST00000428445 KSR1Q8IVT5 923 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 SLC39A11Q8N1S5 342 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 TBCKQ8TEA7 893 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 AUTS2Q8WXX7 1259 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 ASIC4Q96FT7 647 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 CEP89Q96ST8 783 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 TEKT3Q9BXF9 490 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 SEPT9Q9UHD8 586 aaPredicted RBP18.66■□□□□ 0.58
VARS-216ENST00000428445 NID2Q14112 1375 aa18.66■□□□□ 0.58
VARS-216ENST00000428445 KMT2EQ8IZD2 1858 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 A0A087WZ62 844 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 A0A0U1RQF3 1178 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 C2orf71A6NGG8 1288 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 MEIS3P2A8K0S8 358 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 HOXA2O43364 376 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 IFNAR1P17181 557 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 BCAR1P56945 870 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 TCF15Q12870 199 aa18.65■□□□□ 0.58
VARS-216ENST00000428445 MIER3Q7Z3K6 550 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms