RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 MAP3K13O43283 966 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 SART1O43290 800 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 IRX4P78413 519 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 PRAMEF18Q5VWM3 479 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 AP1ARQ63HQ0 302 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 USP17L6PQ6QN14 398 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 SEPT5Q99719 369 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ENTPD7Q9NQZ7 604 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ORC6Q9Y5N6 252 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 NR2E3Q9Y5X4 410 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 COBLO75128 1261 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 TCP1P17987 556 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 MSH2P43246 934 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ZNF235Q14590 738 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 TMEM35BQ8NCS4 154 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 CCHCR1Q8TD31 782 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 OSBP2Q969R2 916 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 CFAP36Q96G28 342 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 DCUN1D1Q96GG9 259 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ZNF512Q96ME7 567 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 DRC3Q9H069 523 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 TRPV6Q9H1D0 765 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 COG4Q9H9E3 785 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 FAM217BQ9NTX9 383 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ASNSD1Q9NWL6 643 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 KLHL14Q9P2G3 628 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ATP11BQ9Y2G3 1177 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 MMP1P03956 469 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 OCM2P0CE71 109 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 OCMP0CE72 109 aaPredicted RBP10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 PLCG1P19174 1290 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 EEF1GP26641 437 aaKnown RBP10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 PTPN12Q05209 780 aaKnown RBP10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 ARMC6Q6NXE6 501 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 CABS1Q96KC9 395 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 TNIP3Q96KP6 325 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 ZBTB18Q99592 522 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 MID2Q9UJV3 735 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 PCDHA7Q9UN72 937 aa10.65□□□□□ -0.71
CLTCL1-202ENST00000427926 RSPH10B2B2RC85 870 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 GGPS1O95749 300 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 RSPH10BP0C881 870 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 SDC4P31431 198 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ALDH7A1P49419 539 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 SFSWAPQ12872 951 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 NME3Q13232 169 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 LPAR1Q92633 364 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ULK4Q96C45 1275 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 CEP95Q96GE4 821 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 DYDC2Q96IM9 177 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 JPH1Q9HDC5 661 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 PSMD14O00487 310 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 TAC1P20366 129 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 TSNAXIP1Q2TAA8 658 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 TAS2R42Q7RTR8 314 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 FBXL13Q8NEE6 735 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 PPP1R12CQ9BZL4 782 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 SIK2Q9H0K1 926 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 SMARCAD1Q9H4L7 1026 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 MYOZ2Q9NPC6 264 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 AFF4Q9UHB7 1163 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 SYNDIG1LA6NDD5 238 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 HNRNPCL2B2RXH8 293 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 H7C1W4 665 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 STXBP3O00186 592 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 HNRNPCL1O60812 293 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 RFC1P35251 1148 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 FOXD4Q12950 439 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 LDHDQ86WU2 507 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 TBC1D16Q8TBP0 767 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 LRRC8CQ8TDW0 803 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ERO1AQ96HE7 468 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 TMEM169Q96HH4 297 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 MTFR1LQ9H019 292 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 UBE4BO95155 1302 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ECEL1O95672 775 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 EPHX2P34913 555 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 OR1G1P47890 313 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ALDH1A3P47895 512 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ANKS3Q6ZW76 656 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 LMNTD2Q8IXW0 634 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 FAM133AQ8N9E0 248 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 FAM20AQ96MK3 541 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 TRIM54Q9BYV2 358 aa10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ZNF70Q9UC06 446 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-202ENST00000427926 ZNF500O60304 480 aaPredicted RBP10.63□□□□□ -0.71
CLTCL1-202ENST00000427926 CYP21A2P08686 494 aa10.63□□□□□ -0.71
CLTCL1-202ENST00000427926 ZNF853P0CG23 659 aa10.63□□□□□ -0.71
CLTCL1-202ENST00000427926 ITGA4P13612 1032 aa10.63□□□□□ -0.71
CLTCL1-202ENST00000427926 MCAMP43121 646 aa10.63□□□□□ -0.71
CLTCL1-202ENST00000427926 TAF1BQ53T94 588 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms