RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 UTRNP46939 3433 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 HSPA9P38646 679 aaKnown RBP15.57■□□□□ 0.08
LIG1-202ENST00000427526 SKIDA1Q1XH10 827 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 FKBP1CQ5VVH2 108 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 RINT1Q6NUQ1 792 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 OLIG1Q8TAK6 271 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 CALR3Q96L12 384 aaKnown RBP15.57■□□□□ 0.08
LIG1-202ENST00000427526 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
LIG1-202ENST00000427526 POLD4Q9HCU8 107 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 STXBP5LQ9Y2K9 1186 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
LIG1-202ENST00000427526 GCNT3O95395 438 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 NOP2P46087 812 aaKnown RBP15.57■□□□□ 0.08
LIG1-202ENST00000427526 STAT2P52630 851 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 ERVK-9P63128 1117 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 KCTD16Q68DU8 428 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 TTC19Q6DKK2 380 aaPredicted RBP15.57■□□□□ 0.08
LIG1-202ENST00000427526 FAM83AQ86UY5 434 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 HSD17B14Q9BPX1 270 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 RGL1Q9NZL6 768 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 GCNT4Q9P109 453 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 INTUQ9ULD6 942 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 BCS1LQ9Y276 419 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 RABGAP1Q9Y3P9 1069 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 IGLV3-22A0A075B6J6 115 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 DDX3XO00571 662 aaKnown RBP eCLIP15.57■□□□□ 0.082e-12■■■□□ 16.8
LIG1-202ENST00000427526 CLIC2O15247 247 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 TCERG1LQ5VWI1 586 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 KDM7AQ6ZMT4 941 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
LIG1-202ENST00000427526 ZMYM2Q9UBW7 1377 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 PIK3CDO00329 1044 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 CAP2P40123 477 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 NFIL3Q16649 462 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 GJB7Q6PEY0 223 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 CEP104O60308 925 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 TBCAO75347 108 aaKnown RBP15.56■□□□□ 0.08
LIG1-202ENST00000427526 RASA3Q14644 834 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 RASGEF1CQ8N431 466 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 SLC30A5Q8TAD4 765 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.56■□□□□ 0.082e-7■■■■□ 20.8
LIG1-202ENST00000427526 GOPCQ9HD26 462 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
LIG1-202ENST00000427526 SFI1A8K8P3 1242 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 EBAG9O00559 213 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 EIF3DO15371 548 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIG1-202ENST00000427526 TBC1D12O60347 775 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 H2AFZP0C0S5 128 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 GAP43P17677 238 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 NPEPPSP55786 919 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 CCDC174Q6PII3 467 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 C1orf186Q6ZWK4 172 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 H2AFVQ71UI9 128 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 IKZF4Q9H2S9 585 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
LIG1-202ENST00000427526 SLITRK3O94933 977 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 PDCLQ13371 301 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 R3HDM1Q15032 1099 aaKnown RBP15.55■□□□□ 0.08
LIG1-202ENST00000427526 OTOP1Q7RTM1 612 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 RNPC3Q96LT9 517 aaKnown RBP15.55■□□□□ 0.08
LIG1-202ENST00000427526 FBXO28Q9NVF7 368 aa15.55■□□□□ 0.08
LIG1-202ENST00000427526 ASTN2O75129 1339 aaPredicted RBP15.55■□□□□ 0.08
LIG1-202ENST00000427526 PGRMC1O00264 195 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 SART1O43290 800 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 CUL1Q13616 776 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 NT5DC3Q86UY8 548 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 VPS36Q86VN1 386 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 PIGOQ8TEQ8 1089 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 PPM1EQ8WY54 764 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 AP1M1Q9BXS5 423 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 VCPKMTQ9H867 229 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 EFCC1Q9HA90 598 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 SYNPO2Q9UMS6 1093 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 LOC102724159A0A0B4J2E5 919 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 FERP16591 822 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 PWP2Q15269 919 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 SAMD7Q7Z3H4 446 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 HES6Q96HZ4 224 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 ATP6V1G3Q96LB4 118 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 FIZ1Q96SL8 496 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 RABEP2Q9H5N1 569 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 NOC2LQ9Y3T9 749 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 H0YGN5 161 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 ZEB2O60315 1214 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 GFPT2O94808 682 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 NMT1P30419 496 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 PSMC2P35998 433 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 ATP1A2P50993 1020 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 CTTNQ14247 550 aaKnown RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 PTPROQ16827 1216 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 PEX26Q7Z412 305 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 LNX1Q8TBB1 728 aaPredicted RBP15.54■□□□□ 0.08
LIG1-202ENST00000427526 WDR18Q9BV38 432 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 TUFT1Q9NNX1 390 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 PLAAQ9Y263 795 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 NFS1Q9Y697 457 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms