RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 MUM1L1Q5H9M0 696 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 TEKT3Q9BXF9 490 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 METTL14Q9HCE5 456 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 DNAJC12Q9UKB3 198 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 SLC16A3O15427 465 aaKnown RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 CEP104O60308 925 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 ASTN2O75129 1339 aaPredicted RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 ITIH3Q06033 890 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 TTC19Q6DKK2 380 aaPredicted RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 GPRC5CQ9NQ84 441 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 TAS2R14Q9NYV8 317 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 RBBP6Q7Z6E9 1792 aaKnown RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 WNT10BO00744 389 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 RAD51CO43502 376 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 EXOC3O60645 756 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 EIF2AK2P19525 551 aaKnown RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 RPS6KA1Q15418 735 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 LRRC57Q8N9N7 239 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
FIRRE-201ENST00000427391 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 MYH11P35749 1972 aa12.67□□□□□ -0.38
FIRRE-201ENST00000427391 K7ENM7 598 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 KIF4AO95239 1232 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 ACTN2P35609 894 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 GALCP54803 685 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 CXCL9Q07325 125 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 B3GNT9Q6UX72 402 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 HS2ST1Q7LGA3 356 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 DDX42Q86XP3 938 aaKnown RBP eCLIP12.66□□□□□ -0.38
FIRRE-201ENST00000427391 TPCN2Q8NHX9 752 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 CASKIN2Q8WXE0 1202 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 ARL8AQ96BM9 186 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 PSD3Q9NYI0 1048 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 F8VZ95 297 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
FIRRE-201ENST00000427391 CLSTN1O94985 981 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 KCNA3P22001 575 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 PRKCIP41743 596 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 ZNF131P52739 623 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 MRPS9P82933 396 aaKnown RBP12.66□□□□□ -0.38
FIRRE-201ENST00000427391 UGCGQ16739 394 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 METTL13Q8N6R0 699 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 FAM84AQ96KN4 292 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
FIRRE-201ENST00000427391 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
FIRRE-201ENST00000427391 ANKRD65E5RJM6 399 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 FLOT1O75955 427 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 H2AFZP0C0S5 128 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 MYCLP12524 364 aaPredicted RBP12.65□□□□□ -0.38
FIRRE-201ENST00000427391 ITGA4P13612 1032 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 PTGER2P43116 358 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 RASA3Q14644 834 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 PHLDB3Q6NSJ2 640 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 H2AFVQ71UI9 128 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 SH2D3CQ8N5H7 860 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 TAF4BQ92750 862 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 DHX15O43143 795 aaKnown RBP12.65□□□□□ -0.38
FIRRE-201ENST00000427391 SORBS3O60504 671 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 ATP9AO75110 1047 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 KRT14P02533 472 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 EPHB4P54760 987 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 NAA35Q5VZE5 725 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 KCTD16Q68DU8 428 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 ADAT2Q7Z6V5 191 aaKnown RBP12.65□□□□□ -0.38
FIRRE-201ENST00000427391 KAT5Q92993 513 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 ARHGEF26Q96DR7 871 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 DDX47Q9H0S4 455 aaKnown RBP12.65□□□□□ -0.38
FIRRE-201ENST00000427391 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 FEM1BQ9UK73 627 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 NENFQ9UMX5 172 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 FRMD4BQ9Y2L6 1034 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 TELO2Q9Y4R8 837 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
FIRRE-201ENST00000427391 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
FIRRE-201ENST00000427391 SOX5P35711 763 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms