RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 FAM47CQ5HY64 1035 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 MARCH8Q5T0T0 291 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 FAM160B1Q5W0V3 765 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 ARL6IP4Q66PJ3 421 aaKnown RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF787Q6DD87 383 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 NCAPH2Q6IBW4 605 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 C7orf31Q8N865 590 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 IGSF22Q8N9C0 903 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 DPF3Q92784 378 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 DYDC2Q96IM9 177 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 EIF2AK1Q9BQI3 630 aaKnown RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 TRPV6Q9H1D0 765 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 SETD4Q9NVD3 440 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 RGL1Q9NZL6 768 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 WRAP73Q9P2S5 460 aaPredicted RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 TCEAL9Q9UHQ7 104 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF215Q9UL58 517 aaPredicted RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 SAMM50Q9Y512 469 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 KAT6AQ92794 2004 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 IGSF9BQ9UPX0 1349 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 TRIM43BA6NCK2 446 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 RRN3P2A6NIE6 340 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 TREHO43280 583 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 HBP1O60381 514 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 BMP15O95972 392 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 FBXO45P0C2W1 286 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 BMP1P13497 986 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 INSRRP14616 1297 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 QARSP47897 775 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 NASPP49321 788 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 WDR4P57081 412 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 PSMC5P62195 406 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 MLLT1Q03111 559 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CEBPZQ03701 1054 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 GRIN1Q05586 938 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CTTNQ14247 550 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 SLC39A14Q15043 492 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 TARBP2Q15633 366 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 DTHD1Q6ZMT9 781 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CATSPER3Q86XQ3 398 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 C4orf19Q8IY42 314 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CRIPAKQ8N1N5 446 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 LINC00301Q8NCQ3 95 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 ATP8B4Q8TF62 1192 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 TRIM43Q96BQ3 446 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CHAMP1Q96JM3 812 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CEP89Q96ST8 783 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 NRBP2Q9NSY0 501 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 TRMT13Q9NUP7 481 aaKnown RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 LRWD1Q9UFC0 647 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 GPSM3Q9Y4H4 160 aa8.31□□□□□ -1.08
LINC01049-201ENST00000426840 MORC2Q9Y6X9 1032 aaPredicted RBP8.31□□□□□ -1.08
LINC01049-201ENST00000426840 MROH7Q68CQ1 1323 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 NRCAMQ92823 1304 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 A0A087WWV3 80 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 C17orf102A2RUQ5 167 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 MBLAC1A4D2B0 266 aaPredicted RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZBTB42B2RXF5 422 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZBTB39O15060 712 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 KIAA0355O15063 1070 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 MED24O75448 989 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 LYPLA2O95372 231 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 CYP2C9P11712 490 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 XRCC6P12956 609 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ITGB8P26012 769 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 KLRC1P26715 233 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 RPA1P27694 616 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 MARCKSP29966 332 aaPredicted RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 CDC25AP30304 524 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 NUCB2P80303 420 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 CYP4A11Q02928 519 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 DNM1Q05193 864 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 PPFIA1Q13136 1202 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 GRIK4Q16099 956 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ECM1Q16610 540 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 PTGISQ16647 500 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TMEM266Q2M3C6 531 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TRIM71Q2Q1W2 868 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 FOXD4L6Q3SYB3 417 aaPredicted RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 XKR3Q5GH77 459 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF484Q5JVG2 852 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ATL3Q6DD88 541 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 FOXD4L3Q6VB84 417 aaPredicted RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ANO5Q75V66 913 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TRMT1LQ7Z2T5 733 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 CKAP2LQ8IYA6 745 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 C7orf61Q8IZ16 206 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 LMBR1Q8WVP7 490 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TRAPPC12Q8WVT3 735 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 DHX38Q92620 1227 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms