RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 KCNT2Q6UVM3 1135 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 ZNF598Q86UK7 904 aaKnown RBP10.03□□□□□ -0.8
COPS6-204ENST00000426712 CKAP2LQ8IYA6 745 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 THNSL1Q8IYQ7 743 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 FBXL6Q8N531 539 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 METTL13Q8N6R0 699 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 MRPL43Q8N983 215 aaKnown RBP10.03□□□□□ -0.8
COPS6-204ENST00000426712 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 AGXT2Q9BYV1 514 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 C6orf50Q9HD87 102 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 NRBP2Q9NSY0 501 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 GABBR1Q9UBS5 961 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 CACNA1HO95180 2353 aa10.03□□□□□ -0.8
COPS6-204ENST00000426712 DENND4AQ7Z401 1863 aa10.02□□□□□ -0.8
COPS6-204ENST00000426712 HIDE1A8MVS5 230 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 DARSP14868 501 aaKnown RBP10.02□□□□□ -0.81
COPS6-204ENST00000426712 TMOD1P28289 359 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 GNA11P29992 359 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 CLCN3P51790 818 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 EVCP57679 992 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 KRT17Q04695 432 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 PRR16Q569H4 304 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 REXO1Q8N1G1 1221 aaKnown RBP10.02□□□□□ -0.81
COPS6-204ENST00000426712 CCDC12Q8WUD4 166 aaPredicted RBP10.02□□□□□ -0.81
COPS6-204ENST00000426712 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 FAM167AQ96KS9 214 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 CEP89Q96ST8 783 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 RIT2Q99578 217 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 NIFKQ9BYG3 293 aaKnown RBP10.02□□□□□ -0.81
COPS6-204ENST00000426712 SPG21Q9NZD8 308 aa10.02□□□□□ -0.81
COPS6-204ENST00000426712 TDRD15B5MCY1 1934 aaKnown RBP10.01□□□□□ -0.81
COPS6-204ENST00000426712 IGKV6-21A0A0C4DH24 114 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 C2orf71A6NGG8 1288 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 WDR64B1ANS9 1081 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 STBD1O95210 358 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 ZSCAN20P17040 1043 aaPredicted RBP10.01□□□□□ -0.81
COPS6-204ENST00000426712 AVPR2P30518 371 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 PPM1AP35813 382 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 TECP42680 631 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
COPS6-204ENST00000426712 GPC3P51654 580 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 PTPN5P54829 565 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 CDC42EP1Q00587 391 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 PTPN21Q16825 1174 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 CLLU1OSQ5K130 101 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 PLPP4Q5VZY2 271 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 B3GNT9Q6UX72 402 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 SLC39A11Q8N1S5 342 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 BICD2Q8TD16 824 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 SLC5A5Q92911 643 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 ZNF558Q96NG5 402 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 PPP1R16BQ96T49 567 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 TCF25Q9BQ70 676 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 ADAM7Q9H2U9 754 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 SH3GLB2Q9NR46 395 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 CHST12Q9NRB3 414 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 DISC1Q9NRI5 854 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 AKT3Q9Y243 479 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 VPS13AQ96RL7 3174 aa10.01□□□□□ -0.81
COPS6-204ENST00000426712 CYP3A7-CYP3A51PA0A087WV96 503 aa10□□□□□ -0.81
COPS6-204ENST00000426712 MSH4O15457 936 aa10□□□□□ -0.81
COPS6-204ENST00000426712 CLASP2O75122 1294 aaKnown RBP10□□□□□ -0.81
COPS6-204ENST00000426712 PSMD10O75832 226 aa10□□□□□ -0.81
COPS6-204ENST00000426712 OATP04181 439 aa10□□□□□ -0.81
COPS6-204ENST00000426712 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
COPS6-204ENST00000426712 CPA1P15085 419 aa10□□□□□ -0.81
COPS6-204ENST00000426712 IBSPP21815 317 aaPredicted RBP10□□□□□ -0.81
COPS6-204ENST00000426712 CYP3A7P24462 503 aa10□□□□□ -0.81
COPS6-204ENST00000426712 SFNP31947 248 aa10□□□□□ -0.81
COPS6-204ENST00000426712 NUBP1P53384 320 aa10□□□□□ -0.81
COPS6-204ENST00000426712 ITIH3Q06033 890 aa10□□□□□ -0.81
COPS6-204ENST00000426712 Q6ZUG5 572 aa10□□□□□ -0.81
COPS6-204ENST00000426712 TRMT1LQ7Z2T5 733 aaKnown RBP10□□□□□ -0.81
COPS6-204ENST00000426712 TMC7Q7Z402 723 aa10□□□□□ -0.81
COPS6-204ENST00000426712 SUGP1Q8IWZ8 645 aaKnown RBP10□□□□□ -0.81
COPS6-204ENST00000426712 LRRC43Q8N309 656 aa10□□□□□ -0.81
COPS6-204ENST00000426712 LRRC71Q8N4P6 559 aa10□□□□□ -0.81
COPS6-204ENST00000426712 RDM1Q8NG50 284 aa10□□□□□ -0.81
COPS6-204ENST00000426712 RSPH1Q8WYR4 309 aa10□□□□□ -0.81
COPS6-204ENST00000426712 CASP10Q92851 521 aa10□□□□□ -0.81
COPS6-204ENST00000426712 RIPOR3Q96MK2 946 aa10□□□□□ -0.81
COPS6-204ENST00000426712 MAP7D2Q96T17 732 aa10□□□□□ -0.81
COPS6-204ENST00000426712 RNF26Q9BY78 433 aaPredicted RBP10□□□□□ -0.81
COPS6-204ENST00000426712 DACT1Q9NYF0 836 aa10□□□□□ -0.81
COPS6-204ENST00000426712 IRAK3Q9Y616 596 aa10□□□□□ -0.81
COPS6-204ENST00000426712 DOCK6Q96HP0 2047 aa10□□□□□ -0.81
COPS6-204ENST00000426712 DOCK8Q8NF50 2099 aa10□□□□□ -0.81
COPS6-204ENST00000426712 CARNS1A5YM72 827 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 M0R2N6 131 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 ZNF623O75123 536 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 IFNAR1P17181 557 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 HSPA4P34932 840 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 JAK3P52333 1124 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 VCPP55072 806 aaKnown RBP9.99□□□□□ -0.81
COPS6-204ENST00000426712 BCAR1P56945 870 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 DRP2Q13474 957 aa9.99□□□□□ -0.81
COPS6-204ENST00000426712 SMC1AQ14683 1233 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms