RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TCP1P17987 556 aaKnown RBP12.62□□□□□ -0.39
UBR4-207ENST00000425413 ABCB4P21439 1286 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 FMO5P49326 533 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 HMGCS2P54868 508 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 GLYCTKQ8IVS8 523 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 RIT2Q99578 217 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 GRID2IPA4D2P6 1211 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 EIF3DO15371 548 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■□□□□ 10.6
UBR4-207ENST00000425413 SLC16A3O15427 465 aaKnown RBP12.62□□□□□ -0.39
UBR4-207ENST00000425413 P4HBP07237 508 aaKnown RBP12.62□□□□□ -0.39
UBR4-207ENST00000425413 PEX3P56589 373 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 TUBB4BP68371 445 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
UBR4-207ENST00000425413 FAM102BQ5T8I3 360 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 ARHGEF16Q5VV41 709 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 WDR93Q6P2C0 686 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 PLCB1Q9NQ66 1216 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 NAGPAQ9UK23 515 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 DNAJC12Q9UKB3 198 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 BACH1O14867 736 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 EVI5O60447 810 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 USP8P40818 1118 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 TNFAIP1Q13829 316 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
UBR4-207ENST00000425413 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 MCF2L2Q86YR7 1114 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 FAM84AQ96KN4 292 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 KIAA1683Q9H0B3 1180 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 CCDC169A6NNP5 214 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 KCNK3O14649 394 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 PLA2G6O60733 806 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 ZBED4O75132 1171 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
UBR4-207ENST00000425413 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
UBR4-207ENST00000425413 CYP2C19P33261 490 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 QARSP47897 775 aaKnown RBP12.61□□□□□ -0.39
UBR4-207ENST00000425413 GCLMP48507 274 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 LMAN1P49257 510 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 RARRES1P49788 294 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 PGM5Q15124 567 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 CCDC70Q6NSX1 233 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 B3GNT9Q6UX72 402 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
UBR4-207ENST00000425413 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 RNF146Q9NTX7 359 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.61□□□□□ -0.39
UBR4-207ENST00000425413 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
UBR4-207ENST00000425413 CCNE2O96020 404 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 ZNF131P52739 623 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 MYL7Q01449 175 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 GPS2Q13227 327 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 SND1Q7KZF4 910 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBR4-207ENST00000425413 KLHL7Q8IXQ5 586 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 LPAR1Q92633 364 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 RPGRIP1Q96KN7 1286 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 LARSQ9P2J5 1176 aaKnown RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 CHORDC1Q9UHD1 332 aaPredicted RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 ODF2LQ9ULJ1 636 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 DDX3XO00571 662 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBR4-207ENST00000425413 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 CCNI2Q6ZMN8 369 aaPredicted RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 TXLNBQ8N3L3 684 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 CCDC127Q96BQ5 260 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 PDCD2LQ9BRP1 358 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 SELENOOQ9BVL4 669 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 UBIAD1Q9Y5Z9 338 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 PCNTO95613 3336 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 STAT1P42224 750 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 ANGEL2Q5VTE6 544 aaKnown RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 PCNX4Q63HM2 1172 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
UBR4-207ENST00000425413 KRT12Q99456 494 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 USP20Q9Y2K6 914 aa12.6□□□□□ -0.39
UBR4-207ENST00000425413 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 VWA5AO00534 786 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 MAP3K10Q02779 954 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 BFSP1Q12934 665 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 TAF4BQ92750 862 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 SAAL1Q96ER3 474 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 F8VZ95 297 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 CEP104O60308 925 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 H2AFZP0C0S5 128 aa12.59□□□□□ -0.39
UBR4-207ENST00000425413 KRT13P13646 458 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms