RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 DNM1Q05193 864 aaKnown RBP20.55■□□□□ 0.88
HDAC6-205ENST00000423941 POU5F1BQ06416 359 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 USP49Q70CQ1 688 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 ZNF410Q86VK4 478 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 KRI1Q8N9T8 703 aaKnown RBP20.55■□□□□ 0.88
HDAC6-205ENST00000423941 LRRC15Q8TF66 581 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 PRPF31Q8WWY3 499 aaKnown RBP20.55■□□□□ 0.88
HDAC6-205ENST00000423941 TMEM143Q96AN5 459 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 EPSTI1Q96J88 318 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 CLIC6Q96NY7 704 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 MTRQ99707 1265 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 MTIF3Q9H2K0 278 aaKnown RBP20.55■□□□□ 0.88
HDAC6-205ENST00000423941 BHMT2Q9H2M3 363 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 ATP6V0A4Q9HBG4 840 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 ERVK-5Q9HDB9 667 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 CFAP45Q9UL16 551 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 PADI3Q9ULW8 664 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 NOC2LQ9Y3T9 749 aaKnown RBP20.55■□□□□ 0.88
HDAC6-205ENST00000423941 E9PMD0 336 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 DARSP14868 501 aaKnown RBP20.54■□□□□ 0.88
HDAC6-205ENST00000423941 UBA7P41226 1012 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 STK38Q15208 465 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 PADI6Q6TGC4 694 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 PHOSPHO2Q8TCD6 241 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 PSPC1Q8WXF1 523 aaKnown RBP20.54■□□□□ 0.88
HDAC6-205ENST00000423941 OSMRQ99650 979 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 IFT122Q9HBG6 1241 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 COL4A3BPQ9Y5P4 624 aa20.54■□□□□ 0.88
HDAC6-205ENST00000423941 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 ARHGEF35A5YM69 484 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 CD52P31358 61 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 WDR5P61964 334 aaKnown RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 NUCB2P80303 420 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 SMAD3P84022 425 aaKnown RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 LAMTOR4Q0VGL1 99 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 MXD4Q14582 209 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 AXDND1Q5T1B0 1012 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 RTN4RL1Q86UN2 441 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 IFNLR1Q8IU57 520 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 KSR1Q8IVT5 923 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 SYT2Q8N9I0 419 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-205ENST00000423941 MCPH1Q8NEM0 835 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 TMX1Q9H3N1 280 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 BLOC1S4Q9NUP1 217 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 SLC4A7Q9Y6M7 1214 aa20.53■□□□□ 0.88
HDAC6-205ENST00000423941 GBF1Q92538 1859 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 A0A087WZ62 844 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 USO1O60763 962 aaKnown RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 SPECC1Q5M775 1068 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 ODR4Q5SWX8 454 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 FAM109BQ6ICB4 259 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 C1orf186Q6ZWK4 172 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 FAM228AQ86W67 206 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 RHPN2Q8IUC4 686 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 KCNG4Q8TDN1 519 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 FDXACB1Q9BRP7 624 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 DAXXQ9UER7 740 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-205ENST00000423941 TTC3P53804 2025 aa20.52■□□□□ 0.88
HDAC6-205ENST00000423941 SOX1O00570 391 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-205ENST00000423941 ENPP3O14638 875 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 GPR182O15218 404 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 CUTAO60888 179 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 RPS6KA5O75582 802 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 SLC12A3P55017 1021 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 RINT1Q6NUQ1 792 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 CRIPAKQ8N1N5 446 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 SYMPKQ92797 1274 aaKnown RBP20.51■□□□□ 0.87
HDAC6-205ENST00000423941 CALML4Q96GE6 196 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 PPP1R16BQ96T49 567 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 SLC9A7Q96T83 725 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 FTHL17Q9BXU8 183 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 GCOM2Q9BZD3 368 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-205ENST00000423941 BMP2KQ9NSY1 1161 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-205ENST00000423941 ST3GAL5Q9UNP4 418 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 GINS2Q9Y248 185 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 ATP6V1DQ9Y5K8 247 aa20.51■□□□□ 0.87
HDAC6-205ENST00000423941 PLCG1P19174 1290 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 GLRA2P23416 452 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 PAK2Q13177 524 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 DSC3Q14574 896 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 KARSQ15046 597 aaKnown RBP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 SRGAP1Q7Z6B7 1085 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 ASAP3Q8TDY4 903 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 LINC01599Q8WXQ3 324 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 ZNF668Q96K58 619 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 INO80BQ9C086 356 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 TSPYL2Q9H2G4 693 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-205ENST00000423941 GPRC5CQ9NQ84 441 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
HDAC6-205ENST00000423941 ATP2A2P16615 1042 aaKnown RBP20.49■□□□□ 0.87
HDAC6-205ENST00000423941 GUCY2CP25092 1073 aa20.49■□□□□ 0.87
HDAC6-205ENST00000423941 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms