RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TOP1MTQ969P6 601 aa12.23□□□□□ -0.45
USP49-204ENST00000423567 YME1L1Q96TA2 773 aa12.23□□□□□ -0.45
USP49-204ENST00000423567 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
USP49-204ENST00000423567 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
USP49-204ENST00000423567 TET1Q8NFU7 2136 aa12.23□□□□□ -0.45
USP49-204ENST00000423567 IGKV6-21A0A0C4DH24 114 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 DENND3A2RUS2 1198 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
USP49-204ENST00000423567 LAD1O00515 517 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 ENPP3O14638 875 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
USP49-204ENST00000423567 GPR32O75388 356 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 LYPLA2O95372 231 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 GPC3P51654 580 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 NPEPPSP55786 919 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 TAP1Q03518 808 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 HAUS3Q68CZ6 603 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 TCP11Q8WWU5 503 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 GCOM2Q9BZD3 368 aaPredicted RBP12.22□□□□□ -0.45
USP49-204ENST00000423567 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
USP49-204ENST00000423567 PRDM12Q9H4Q4 367 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 CDHR5Q9HBB8 845 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 SUCLA2Q9P2R7 463 aaPredicted RBP12.22□□□□□ -0.45
USP49-204ENST00000423567 WRAP73Q9P2S5 460 aaPredicted RBP12.22□□□□□ -0.45
USP49-204ENST00000423567 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 ST3GAL5Q9UNP4 418 aa12.22□□□□□ -0.45
USP49-204ENST00000423567 MYH9P35579 1960 aaKnown RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 ZSCAN20P17040 1043 aaPredicted RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 PTGDRQ13258 359 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 NBR1Q14596 966 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 EMC2Q15006 297 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 ZNF410Q86VK4 478 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 RHPN2Q8IUC4 686 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 TMEM40Q8WWA1 233 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 TGS1Q96RS0 853 aaKnown RBP12.21□□□□□ -0.45
USP49-204ENST00000423567 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 ADAMTS10Q9H324 1103 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 CERS4Q9HA82 394 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 ERVK-5Q9HDB9 667 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 TUFT1Q9NNX1 390 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 ANKEF1Q9NU02 776 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 LRWD1Q9UFC0 647 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 PCDHB6Q9Y5E3 794 aa12.21□□□□□ -0.45
USP49-204ENST00000423567 LCHNA4D1U4 455 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 DGAT1O75907 488 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP49-204ENST00000423567 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 IBSPP21815 317 aaPredicted RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 IGFBP4P22692 258 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 SFPQP23246 707 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP49-204ENST00000423567 PRPHP41219 470 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 DRP2Q13474 957 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 FAM228AQ86W67 206 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 NPAS4Q8IUM7 802 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 MAFAQ8NHW3 353 aaPredicted RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 PSPC1Q8WXF1 523 aaKnown RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 ZNF668Q96K58 619 aaPredicted RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 NACC1Q96RE7 527 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 MTRQ99707 1265 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 ADAM2Q99965 735 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 POLR3CQ9BUI4 534 aaPredicted RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 DHX33Q9H6R0 707 aaKnown RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 ATP6V0A4Q9HBG4 840 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
USP49-204ENST00000423567 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
USP49-204ENST00000423567 LINC01553A4QN01 128 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 ZBTB39O15060 712 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 ASAP2O43150 1006 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 HSP90AA1P07900 732 aaKnown RBP12.19□□□□□ -0.46
USP49-204ENST00000423567 MUTP22033 750 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 RPA1P27694 616 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
USP49-204ENST00000423567 SARSP49591 514 aaKnown RBP12.19□□□□□ -0.46
USP49-204ENST00000423567 PDIA5Q14554 519 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
USP49-204ENST00000423567 KRT79Q5XKE5 535 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 SLC24A5Q71RS6 500 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 FIBCD1Q8N539 461 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 C4orf32Q8N8J7 132 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 PIGOQ8TEQ8 1089 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 LINC01599Q8WXQ3 324 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 SNX21Q969T3 373 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 TMEM143Q96AN5 459 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 NLRP4Q96MN2 994 aa12.19□□□□□ -0.46
USP49-204ENST00000423567 SAMD11Q96NU1 681 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms