RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 SHISA4Q96DD7 197 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 NEK1Q96PY6 1258 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 MMS19Q96T76 1030 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 NAA15Q9BXJ9 866 aaKnown RBP5.3□□□□□ -1.56
ITGB1-205ENST00000423113 GLIS2Q9BZE0 524 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-205ENST00000423113 SLC38A10Q9HBR0 1119 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 RTEL1Q9NZ71 1219 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 GGT7Q9UJ14 662 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 FEM1BQ9UK73 627 aa5.3□□□□□ -1.56
ITGB1-205ENST00000423113 GBF1Q92538 1859 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 SLC26A4O43511 780 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 IFNAR1P17181 557 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 XBP1P17861 261 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CCND1P24385 295 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 NLRP5P59047 1200 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 GUCY2DQ02846 1103 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 NOGQ13253 232 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 SEPT6Q14141 434 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 SPA17Q15506 151 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 ABCB5Q2M3G0 1257 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 KRT71Q3SY84 523 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CERKLQ49MI3 558 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 MAP1SQ66K74 1059 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 RGMBQ6NW40 437 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 WDR93Q6P2C0 686 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 RBM43Q6ZSC3 357 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 MFSD6Q6ZSS7 791 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 TMTC3Q6ZXV5 915 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 TMTC1Q8IUR5 882 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 RRP36Q96EU6 259 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CEP95Q96GE4 821 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 SPATA17Q96L03 361 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 DDX23Q9BUQ8 820 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 PREBQ9HCU5 417 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 PCDHA7Q9UN72 937 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CELF2O95319 508 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CTDNEP1O95476 244 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 KRT9P35527 623 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CCT6AP40227 531 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 RFC5P40937 340 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 COG7P83436 770 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 CBX3Q13185 183 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 BLMHQ13867 455 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 DEFB115Q30KQ5 88 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 MORN1Q5T089 497 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 NUGGCQ68CJ6 796 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 ATL3Q6DD88 541 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 APOA5Q6Q788 366 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 MAMDC4Q6UXC1 1216 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 FASTKD5Q7L8L6 764 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 IFT20Q8IY31 132 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 KIF2BQ8N4N8 673 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 TEX9Q8N6V9 391 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 KCNG4Q8TDN1 519 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 SPOCK2Q92563 424 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 DDX12PQ92771 950 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 ELAC2Q9BQ52 826 aaKnown RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 TMEM47Q9BQJ4 181 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 RNF26Q9BY78 433 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-205ENST00000423113 MCM9Q9NXL9 1143 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 STIM2Q9P246 746 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 NLRC5Q86WI3 1866 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 TNKSO95271 1327 aa5.29□□□□□ -1.56
ITGB1-205ENST00000423113 IKBKBO14920 756 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 PRPF3O43395 683 aaKnown RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 USO1O60763 962 aaKnown RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 SHOX2O60902 331 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 ALDH1A1P00352 501 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 IFNAR2P48551 515 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 VPS41P49754 854 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 PNOCQ13519 176 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 PKN1Q16512 942 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 IFI16Q16666 785 aaKnown RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 P3H1Q32P28 736 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 ANKRD20A2Q5SQ80 823 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 ANKRD20A1Q5TYW2 823 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 ANKRD20A3Q5VUR7 823 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 OTUD7BQ6GQQ9 843 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 TLDC1Q6P9B6 456 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 MOXD1Q6UVY6 613 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 RUFY4Q6ZNE9 571 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 YTHDF3Q7Z739 585 aaKnown RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 ZC3H18Q86VM9 953 aaKnown RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 CLMNQ96JQ2 1002 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 NDNQ99608 321 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 PTPN18Q99952 460 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 KATNBL1Q9H079 304 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 PIDD1Q9HB75 910 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 UTP6Q9NYH9 597 aaKnown RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 RCOR1Q9UKL0 485 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 ZNF214Q9UL59 606 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-205ENST00000423113 TMEM110-MUSTN1A8MSY1 372 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 DNM1LO00429 736 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 TACC1O75410 805 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 CETPP11597 493 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 TMOD1P28289 359 aa5.28□□□□□ -1.56
ITGB1-205ENST00000423113 CASP14P31944 242 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms