RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 PCDHB7Q9Y5E2 793 aa20.22■□□□□ 0.83
UBXN11-208ENST00000421827 C9IYK1 514 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 H3BNC9 293 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 LINC00271P0C7V0 271 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 IBSPP21815 317 aaPredicted RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 YWHABP31946 246 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 MCM7P33993 719 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 CTNNB1P35222 781 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 BMPR1AP36894 532 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 GPM6BQ13491 265 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 CTTNQ14247 550 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 DSC3Q14574 896 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 OTUD6AQ7L8S5 288 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 TPH2Q8IWU9 490 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 EXOC8Q8IYI6 725 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 CMTR2Q8IYT2 770 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 ATXN2LQ8WWM7 1075 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 CLP1Q92989 425 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 EIF2AK1Q9BQI3 630 aaKnown RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 TMEM60Q9H2L4 133 aa20.21■□□□□ 0.83
UBXN11-208ENST00000421827 SUCLA2Q9P2R7 463 aaPredicted RBP20.21■□□□□ 0.83
UBXN11-208ENST00000421827 SLITRK3O94933 977 aa20.2■□□□□ 0.82
UBXN11-208ENST00000421827 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
UBXN11-208ENST00000421827 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
UBXN11-208ENST00000421827 SLC7A3Q8WY07 619 aa20.2■□□□□ 0.82
UBXN11-208ENST00000421827 HSD17B14Q9BPX1 270 aa20.2■□□□□ 0.82
UBXN11-208ENST00000421827 COL25A1Q9BXS0 654 aaPredicted RBP20.2■□□□□ 0.82
UBXN11-208ENST00000421827 GCOM2Q9BZD3 368 aaPredicted RBP20.2■□□□□ 0.82
UBXN11-208ENST00000421827 CUL9Q8IWT3 2517 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 C5orf67F2Z3F1 127 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 CD2BP2O95400 341 aaKnown RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 RB1P06400 928 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 ZSCAN20P17040 1043 aaPredicted RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 RFC5P40937 340 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 GATMP50440 423 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 POLGP54098 1239 aaPredicted RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 FAM189BP81408 668 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 ORC2Q13416 577 aaPredicted RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 PTPROQ16827 1216 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 XKR9Q5GH70 373 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 TJAP1Q5JTD0 557 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 ZNF410Q86VK4 478 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 RHPN2Q8IUC4 686 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 MRPL38Q96DV4 380 aaKnown RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 TMX3Q96JJ7 454 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 DHX33Q9H6R0 707 aaKnown RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
UBXN11-208ENST00000421827 MRPL42Q9Y6G3 142 aaKnown RBP20.19■□□□□ 0.82
UBXN11-208ENST00000421827 SPTBN5Q9NRC6 3674 aaKnown RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 VCANP13611 3396 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 NLRC5Q86WI3 1866 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 A0A087WZ62 844 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 ZBTB39O15060 712 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 CSDE1O75534 798 aaKnown RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 LYPLA2O95372 231 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 FGFR4P22455 802 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 TRAPPC10P48553 1259 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 MCM2P49736 904 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 MRPS5P82675 430 aaKnown RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 ZNF174Q15697 407 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 PAN2Q504Q3 1202 aaKnown RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 FDXACB1Q9BRP7 624 aaPredicted RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 C11orf84Q9BUA3 381 aaPredicted RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 ELAC1Q9H777 363 aaKnown RBP20.18■□□□□ 0.82
UBXN11-208ENST00000421827 TMEM161AQ9NX61 479 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 RALGAPA2Q2PPJ7 1873 aa20.18■□□□□ 0.82
UBXN11-208ENST00000421827 POTEMA6NI47 508 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.82
UBXN11-208ENST00000421827 TTC38Q5R3I4 469 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 KSR1Q8IVT5 923 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 ASB2Q96Q27 587 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 PLVAPQ9BX97 442 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 INO80BQ9C086 356 aaPredicted RBP20.17■□□□□ 0.82
UBXN11-208ENST00000421827 ATP6V0A4Q9HBG4 840 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 NOL7Q9UMY1 257 aaKnown RBP20.17■□□□□ 0.82
UBXN11-208ENST00000421827 COG5Q9UP83 839 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 COL4A3BPQ9Y5P4 624 aa20.17■□□□□ 0.82
UBXN11-208ENST00000421827 TBKBP1A7MCY6 615 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 GAS2O43903 313 aaKnown RBP20.16■□□□□ 0.82
UBXN11-208ENST00000421827 OR52Z1P0C646 297 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 SFPQP23246 707 aaKnown RBP eCLIP20.16■□□□□ 0.82
UBXN11-208ENST00000421827 EMC2Q15006 297 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 FAM102BQ5T8I3 360 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 PRPF31Q8WWY3 499 aaKnown RBP20.16■□□□□ 0.82
UBXN11-208ENST00000421827 PSPC1Q8WXF1 523 aaKnown RBP20.16■□□□□ 0.82
UBXN11-208ENST00000421827 SYMPKQ92797 1274 aaKnown RBP20.16■□□□□ 0.82
UBXN11-208ENST00000421827 TMEM143Q96AN5 459 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 NLRP4Q96MN2 994 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 BMP2KQ9NSY1 1161 aaPredicted RBP20.16■□□□□ 0.82
UBXN11-208ENST00000421827 ANKEF1Q9NU02 776 aa20.16■□□□□ 0.82
UBXN11-208ENST00000421827 XIRP2A4UGR9 3374 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 TCP11Q8WWU5 503 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 P2RX5Q93086 422 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 HLA-CQ95604 372 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 LMAN2LQ9H0V9 348 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 CHST12Q9NRB3 414 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 DACT1Q9NYF0 836 aa20.15■□□□□ 0.82
UBXN11-208ENST00000421827 GRM6O15303 877 aa20.14■□□□□ 0.81
UBXN11-208ENST00000421827 HOXA2O43364 376 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms