RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 HACE1Q8IYU2 909 aa8.12□□□□□ -1.11
BDNF-209ENST00000420794 HPS3Q969F9 1004 aa8.12□□□□□ -1.11
BDNF-209ENST00000420794 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
BDNF-209ENST00000420794 SEPT11Q9NVA2 429 aaKnown RBP8.12□□□□□ -1.11
BDNF-209ENST00000420794 LYPLA2O95372 231 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 SKILP12757 684 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 KCNA2P16389 499 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 NMT1P30419 496 aaKnown RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 USP8P40818 1118 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 WDR44Q5JSH3 913 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 RHPN2Q8IUC4 686 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 ATP8B4Q8TF62 1192 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 HHIPL1Q96JK4 782 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 ANKFY1Q9P2R3 1169 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 UBE4BO95155 1302 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 KPNA6O60684 536 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 LDHAP00338 332 aaKnown RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 NR3C1P04150 777 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 ATP1A3P13637 1013 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 TNNI1P19237 187 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 CYP2C19P33261 490 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 SLC12A3P55017 1021 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 MAPK8IP2Q13387 824 aaPredicted RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 MAML3Q96JK9 1138 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 FAM49AQ9H0Q0 323 aaPredicted RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 KIAA1586Q9HCI6 787 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 SUCLA2Q9P2R7 463 aaPredicted RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 H3BRB1 525 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 PTGS1P23219 599 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 CDC25BP30305 580 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 CYLC1P35663 651 aaPredicted RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 EDRF1Q3B7T1 1238 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 ANKRD40Q6AI12 368 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 KIAA1328Q86T90 577 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 CCDC60Q8IWA6 550 aaPredicted RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 XXYLT1Q8NBI6 393 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 TMEM143Q96AN5 459 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 HVCN1Q96D96 273 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 OLFML3Q9NRN5 406 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 TCHHQ07283 1943 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 IGF2BP3O00425 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
BDNF-209ENST00000420794 AKR1B10O60218 316 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 TBC1D8O95759 1140 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
BDNF-209ENST00000420794 CCDC144BQ3MJ40 725 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 ARHGAP29Q52LW3 1261 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 PPP1R9BQ96SB3 815 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
BDNF-209ENST00000420794 FRMPD4Q14CM0 1322 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 ECM29Q5VYK3 1845 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 FARP2O94887 1054 aaPredicted RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 MAP2K2P36507 400 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 SNRPFP62306 86 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 TRPC3Q13507 836 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 KRT31Q15323 416 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 DUSP28Q4G0W2 176 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 VWA3BQ502W6 1294 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 RNF180Q86T96 592 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 TLK2Q86UE8 772 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 RNF149Q8NC42 400 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 CRYGNQ8WXF5 182 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 SSC5DA1L4H1 1573 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 RRP9O43818 475 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 FKTNO75072 461 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 CCNE2O96020 404 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 AFPP02771 609 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 KRT9P35527 623 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 FLT3LGP49771 235 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 GRB14Q14449 540 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 EFCAB12Q6NXP0 572 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 ABHD15Q6UXT9 468 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 INTS8Q75QN2 995 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 PLPPR4Q7Z2D5 763 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 CCDC127Q96BQ5 260 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.1□□□□□ -1.11
BDNF-209ENST00000420794 MRPL4Q9BYD3 311 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 IGSF9BQ9UPX0 1349 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 ZNF233A6NK53 670 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 RSPH10B2B2RC85 870 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 KIAA0391O15091 583 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 CLDN3O15551 220 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 RSPH10BP0C881 870 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 MAPTP10636 758 aaKnown RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 C1orf186Q6ZWK4 172 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 CCDC51Q96ER9 411 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 GCOM2Q9BZD3 368 aaPredicted RBP8.1□□□□□ -1.11
BDNF-209ENST00000420794 NDST4Q9H3R1 872 aa8.1□□□□□ -1.11
BDNF-209ENST00000420794 GOLGA6L9A6NEM1 432 aa8.09□□□□□ -1.11
BDNF-209ENST00000420794 CNMDO75829 334 aa8.09□□□□□ -1.11
BDNF-209ENST00000420794 MYBP10242 640 aa8.09□□□□□ -1.11
BDNF-209ENST00000420794 YARSP54577 528 aaKnown RBP8.09□□□□□ -1.11
BDNF-209ENST00000420794 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.11
BDNF-209ENST00000420794 RAPGEF1Q13905 1077 aa8.09□□□□□ -1.11
BDNF-209ENST00000420794 PCSK9Q8NBP7 692 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms