RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 GRB10Q13322 594 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 KIZQ2M2Z5 673 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
PTPN18-204ENST00000420717 FTHL17Q9BXU8 183 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 CDHR5Q9HBB8 845 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 SUCLA2Q9P2R7 463 aaPredicted RBP16.06■□□□□ 0.16
PTPN18-204ENST00000420717 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 TTC3P53804 2025 aa16.06■□□□□ 0.16
PTPN18-204ENST00000420717 TMEM265A0A087WTH1 108 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.05■□□□□ 0.16
PTPN18-204ENST00000420717 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.05■□□□□ 0.16
PTPN18-204ENST00000420717 CYP11B2P19099 503 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 CD52P31358 61 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 PAK2Q13177 524 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 MXD4Q14582 209 aaPredicted RBP16.05■□□□□ 0.16
PTPN18-204ENST00000420717 KCNK18Q7Z418 384 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 CABP7Q86V35 215 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 FAM228AQ86W67 206 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
PTPN18-204ENST00000420717 KCNG4Q8TDN1 519 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 OSMRQ99650 979 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 BHMT2Q9H2M3 363 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 IFT122Q9HBG6 1241 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 KCND2Q9NZV8 630 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 PADI3Q9ULW8 664 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 DNM3Q9UQ16 869 aa16.05■□□□□ 0.16
PTPN18-204ENST00000420717 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
PTPN18-204ENST00000420717 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 ARHGEF35A5YM69 484 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 SOX1O00570 391 aaPredicted RBP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 SPTLC2O15270 562 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 RPS6KA5O75582 802 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 MARCKSP29966 332 aaPredicted RBP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 UBA7P41226 1012 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 LAMTOR4Q0VGL1 99 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 STK38Q15208 465 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 PCBP1Q15365 356 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 PADI6Q6TGC4 694 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 RHPN2Q8IUC4 686 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 PRPF31Q8WWY3 499 aaKnown RBP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 LINC01599Q8WXQ3 324 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 TIPINQ9BVW5 301 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 TSPYL2Q9H2G4 693 aaPredicted RBP16.04■□□□□ 0.16
PTPN18-204ENST00000420717 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 ATP6V1DQ9Y5K8 247 aa16.04■□□□□ 0.16
PTPN18-204ENST00000420717 GPR182O15218 404 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
PTPN18-204ENST00000420717 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 KCNJ6P48051 423 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 NUCB2P80303 420 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 DSC3Q14574 896 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 FAM109BQ6ICB4 259 aaPredicted RBP16.03■□□□□ 0.16
PTPN18-204ENST00000420717 HERC6Q8IVU3 1022 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 SYT2Q8N9I0 419 aaPredicted RBP16.03■□□□□ 0.16
PTPN18-204ENST00000420717 LRRC15Q8TF66 581 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 SYMPKQ92797 1274 aaKnown RBP16.03■□□□□ 0.16
PTPN18-204ENST00000420717 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 GCOM2Q9BZD3 368 aaPredicted RBP16.03■□□□□ 0.16
PTPN18-204ENST00000420717 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 RCOR1Q9UKL0 485 aa16.03■□□□□ 0.16
PTPN18-204ENST00000420717 A0A087WZ62 844 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 ZBBXA8MT70 800 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 E9PMD0 336 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 GJB5O95377 273 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 GLRA2P23416 452 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 SLC12A3P55017 1021 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 PTENP60484 403 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 DEFB103AP81534 67 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 CEBPZQ03701 1054 aaKnown RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 DNM1Q05193 864 aaKnown RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 CAPSQ13938 189 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 RAB30Q15771 203 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 AXDND1Q5T1B0 1012 aaPredicted RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 CDCA2Q69YH5 1023 aaPredicted RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 C1orf186Q6ZWK4 172 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 SRGAP1Q7Z6B7 1085 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 ASAP3Q8TDY4 903 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 KCNN1Q92952 543 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 CDK5RAP3Q96JB5 506 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 FDXACB1Q9BRP7 624 aaPredicted RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 TRAIPQ9BWF2 469 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 INO80BQ9C086 356 aaPredicted RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 STK17AQ9UEE5 414 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.16
PTPN18-204ENST00000420717 ST3GAL5Q9UNP4 418 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 PCDHA11Q9Y5I1 949 aa16.02■□□□□ 0.16
PTPN18-204ENST00000420717 TCHHQ07283 1943 aa16.02■□□□□ 0.15
PTPN18-204ENST00000420717 SZT2Q5T011 3432 aa16.01■□□□□ 0.15
PTPN18-204ENST00000420717 A0A087WWV3 80 aa16.01■□□□□ 0.15
PTPN18-204ENST00000420717 CUTAO60888 179 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms