RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CTAGE6Q86UF2 777 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CTAGE4Q8IX94 777 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 MS4A14Q96JA4 679 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 POP1Q99575 1024 aaKnown RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 FAM184BQ9ULE4 1060 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 SERPING1P05155 500 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 VSNL1P62760 191 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 C2orf54Q08AI8 447 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 BSNDQ8WZ55 320 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 RABGGTAQ92696 567 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CYP39A1Q9NYL5 469 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 MYO1AQ9UBC5 1043 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 AFG3L2Q9Y4W6 797 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 SLC26A4O43511 780 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 GUCY2CP25092 1073 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 GCLMP48507 274 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 ASIC2Q16515 512 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 SEPT14Q6ZU15 432 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 HAUS6Q7Z4H7 955 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 NLRX1Q86UT6 975 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 SAAL1Q96ER3 474 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 OTUD5Q96G74 571 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 PAGR1Q9BTK6 254 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 AS3MTQ9HBK9 375 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 CHORDC1Q9UHD1 332 aaPredicted RBP9.62□□□□□ -0.87
SNCA-206ENST00000420646 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
SNCA-206ENST00000420646 ANKRD63C9JTQ0 380 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 IRF6O14896 467 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 ZRANB2O95218 330 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNCA-206ENST00000420646 LMNB1P20700 586 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 FOXR2Q6PJQ5 311 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 GBP6Q6ZN66 633 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 APOBEC3FQ8IUX4 373 aaKnown RBP9.61□□□□□ -0.87
SNCA-206ENST00000420646 CCDC60Q8IWA6 550 aaPredicted RBP9.61□□□□□ -0.87
SNCA-206ENST00000420646 GPC2Q8N158 579 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 CAGE1Q8TC20 777 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 PLEKHO2Q8TD55 490 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 HDAC7Q8WUI4 952 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 CCDC127Q96BQ5 260 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 ELP3Q9H9T3 547 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 TBC1D22BQ9NU19 505 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 TMOD4Q9NZQ9 345 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 OGFRQ9NZT2 677 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 SNCAIPQ9Y6H5 919 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 RBBP6Q7Z6E9 1792 aaKnown RBP9.61□□□□□ -0.87
SNCA-206ENST00000420646 EIF3DO15371 548 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNCA-206ENST00000420646 PPP1R37O75864 691 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 ECM2O94769 699 aaPredicted RBP9.61□□□□□ -0.87
SNCA-206ENST00000420646 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 FMO5P49326 533 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 PPP3CAQ08209 521 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 PDE4CQ08493 712 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 PAPD7Q5XG87 772 aaKnown RBP9.61□□□□□ -0.87
SNCA-206ENST00000420646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNCA-206ENST00000420646 KAT5Q92993 513 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 CEP170P1Q96L14 293 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 TEX13BQ9BXU2 312 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 LARSQ9P2J5 1176 aaKnown RBP9.61□□□□□ -0.87
SNCA-206ENST00000420646 ODF2LQ9ULJ1 636 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 LTBP3Q9NS15 1303 aa9.61□□□□□ -0.87
SNCA-206ENST00000420646 WDR64B1ANS9 1081 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PALMO75781 387 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 LCA5LO95447 670 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 KCNA2P16389 499 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PLA2G4AP47712 749 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 SLC18A3Q16572 532 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 GADL1Q6ZQY3 521 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PALB2Q86YC2 1186 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 ANKRD35Q8N283 1001 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 NSUN6Q8TEA1 469 aaKnown RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 AIPL1Q9NZN9 384 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 HYOU1Q9Y4L1 999 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 DOCK5Q9H7D0 1870 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PLS3P13797 630 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 ADSSP30520 456 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 GYS2P54840 703 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PSMC5P62195 406 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 SLC7A5Q01650 507 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 WHAMMP3Q1A5X7 153 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PHLDB3Q6NSJ2 640 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 CBWD2Q8IUF1 395 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 STRA6Q9BX79 667 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 MOV10L1Q9BXT6 1211 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms