RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 PPP1R16BQ96T49 567 aa14.22□□□□□ -0.13
ATG4B-208ENST00000419606 FGFBP2Q9BYJ0 223 aa14.22□□□□□ -0.13
ATG4B-208ENST00000419606 ZHX3Q9H4I2 956 aa14.22□□□□□ -0.13
ATG4B-208ENST00000419606 PCDHA2Q9Y5H9 948 aa14.22□□□□□ -0.13
ATG4B-208ENST00000419606 VTNP04004 478 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 GNAT1P11488 350 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 GLRA2P23416 452 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 PTPN11Q06124 597 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-208ENST00000419606 TMEM62Q0P6H9 643 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 LRRC26Q2I0M4 334 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-208ENST00000419606 TRIM60Q495X7 471 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 KMT5BQ4FZB7 885 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 SFR1Q86XK3 245 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 FAM126BQ8IXS8 530 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 GLIS3Q8NEA6 775 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 MCPH1Q8NEM0 835 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 PRPF31Q8WWY3 499 aaKnown RBP14.21□□□□□ -0.13
ATG4B-208ENST00000419606 DHX38Q92620 1227 aaKnown RBP14.21□□□□□ -0.13
ATG4B-208ENST00000419606 LRRC27Q9C0I9 530 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 PANK4Q9NVE7 773 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 KCND2Q9NZV8 630 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 TBC1D7Q9P0N9 293 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 PCDH10Q9P2E7 1040 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 SUCLA2Q9P2R7 463 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-208ENST00000419606 PPME1Q9Y570 386 aa14.21□□□□□ -0.13
ATG4B-208ENST00000419606 SMIM35A0A1B0GVV1 85 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 FRMD3A2A2Y4 597 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 CCDC85CA6NKD9 419 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 BIN1O00499 593 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 PQBP1O60828 265 aaKnown RBP14.2□□□□□ -0.14
ATG4B-208ENST00000419606 CAPN15O75808 1086 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 FAM13AO94988 1023 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 CD4P01730 458 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 SARSP49591 514 aaKnown RBP14.2□□□□□ -0.14
ATG4B-208ENST00000419606 ZNF131P52739 623 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 COASYQ13057 564 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 SNX17Q15036 470 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 IER5Q5VY09 327 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 UNC13DQ70J99 1090 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 NECAB2Q7Z6G3 386 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 SERINC5Q86VE9 423 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 RHPN2Q8IUC4 686 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 MYCT1Q8N699 235 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 RETREG2Q8NC44 543 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 SPATA20Q8TB22 786 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 KIFC3Q9BVG8 833 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 CDHR5Q9HBB8 845 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 MAN1B1Q9UKM7 699 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 ODF2LQ9ULJ1 636 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 AKT3Q9Y243 479 aa14.2□□□□□ -0.14
ATG4B-208ENST00000419606 ALPK3Q96L96 1907 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 ADGRA3Q8IWK6 1321 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 TBCAO75347 108 aaKnown RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 BMP6P22004 513 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 NMT1P30419 496 aaKnown RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 PEX3P56589 373 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 TLE2Q04725 743 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 EHHADHQ08426 723 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 LAMTOR4Q0VGL1 99 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 CAPSQ13938 189 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 TRIM71Q2Q1W2 868 aaKnown RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 HERC4Q5GLZ8 1057 aaPredicted RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 RBM43Q6ZSC3 357 aaKnown RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 CCDC65Q8IXS2 484 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 KIFAP3Q92845 792 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 SMARCE1Q969G3 411 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 DRC1Q96MC2 740 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 FIZ1Q96SL8 496 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 JPH2Q9BR39 696 aaPredicted RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 TIPINQ9BVW5 301 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 OSBPL7Q9BZF2 842 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 HOOK1Q9UJC3 728 aaKnown RBP14.19□□□□□ -0.14
ATG4B-208ENST00000419606 ATP11BQ9Y2G3 1177 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 SIP14410 1827 aa14.19□□□□□ -0.14
ATG4B-208ENST00000419606 PVALEFA0A1B0GWK0 134 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 GAS2O43903 313 aaKnown RBP14.18□□□□□ -0.14
ATG4B-208ENST00000419606 MYL1P05976 194 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 SRGAP2CP0DJJ0 459 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 PLS3P13797 630 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 TMOD1P28289 359 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 NPTX2P47972 431 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 DNM2P50570 870 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 CASP5P51878 434 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 RTP1P59025 263 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 NLRP11P59045 1033 aaKnown RBP14.18□□□□□ -0.14
ATG4B-208ENST00000419606 PTK7Q13308 1070 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 KIZQ2M2Z5 673 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 ODR4Q5SWX8 454 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 NT5DC1Q5TFE4 455 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 SMYD4Q8IYR2 804 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-208ENST00000419606 TCP11Q8WWU5 503 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 PSPC1Q8WXF1 523 aaKnown RBP14.18□□□□□ -0.14
ATG4B-208ENST00000419606 CCDC34Q96HJ3 373 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 NLRP4Q96MN2 994 aa14.18□□□□□ -0.14
ATG4B-208ENST00000419606 GZF1Q9H116 711 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms