RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CLEC2LP0C7M8 214 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 CNGA1P29973 690 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 LSP1P33241 339 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 ADAM15Q13444 863 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 CXorf67Q86X51 503 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 LYSMD2Q8IV50 215 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 IFNL2Q8IZJ0 200 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 COG1Q8WTW3 980 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 GNRHR2Q96P88 292 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 TMPRSS11EQ9UL52 423 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 DENND2AQ9ULE3 1009 aa6.32□□□□□ -1.4
HMGB1P49-201ENST00000418882 A0A0A6YYJ9 748 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 PRSS38A1L453 326 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 ZEB2O60315 1214 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 KDM1AO60341 852 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 PCDH8O95206 1070 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 PFKMP08237 780 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 MANFP55145 182 aaKnown RBP6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 TMPRSS15P98073 1019 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 NFKB2Q00653 900 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 HGFACQ04756 655 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 DGKDQ16760 1214 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 HDGFL2Q7Z4V5 671 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 PLEKHH3Q7Z736 793 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 OR14K1Q8NGZ2 314 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 NEIL1Q96FI4 390 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 ANO3Q9BYT9 981 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 SPC25Q9HBM1 224 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 DNAI1Q9UI46 699 aa6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
HMGB1P49-201ENST00000418882 ZNF536O15090 1300 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 GPR39O43194 453 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 DNAJC6O75061 913 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 BCAR1P56945 870 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 MAP3K12Q12852 859 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 DUSP8Q13202 625 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 NFYCQ13952 458 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 RASSF3Q86WH2 238 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 DYDC2Q96IM9 177 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 SCYL1Q96KG9 808 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 LRRC37BQ96QE4 947 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 DPYSL5Q9BPU6 564 aa6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 USP36Q9P275 1121 aaKnown RBP6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 SAE1Q9UBE0 346 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 CTDP1Q9Y5B0 961 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P49-201ENST00000418882 MYPNQ86TC9 1320 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 C2orf78A6NCI8 922 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 ARHGAP6O43182 974 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 SYN1P17600 705 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 SAFB2Q14151 953 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 TRIM25Q14258 630 aaKnown RBP6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 ZMAT1Q5H9K5 638 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 FRMD7Q6ZUT3 714 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 ESPNLQ6ZVH7 1005 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 USP30Q70CQ3 517 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 BMP8AQ7Z5Y6 402 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 DDX42Q86XP3 938 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 SLC41A1Q8IVJ1 513 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 RPGRQ92834 1020 aaKnown RBP6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 LMF1Q96S06 567 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 FDXACB1Q9BRP7 624 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 POLR3BQ9NW08 1133 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 NR2E1Q9Y466 385 aa6.29□□□□□ -1.4
HMGB1P49-201ENST00000418882 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 PRKD3O94806 890 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 MEOX1P50221 254 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 ADAM8P78325 824 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 AMPD3Q01432 767 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 PLP2Q04941 152 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 ICAM4Q14773 271 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 SURF1Q15526 300 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 CT83Q5H943 113 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 PITRM1Q5JRX3 1037 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 CCDC62Q6P9F0 684 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 FERMT2Q96AC1 680 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 NOL10Q9BSC4 688 aaKnown RBP6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 SEC61A2Q9H9S3 476 aa6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 NOC2LQ9Y3T9 749 aaKnown RBP6.28□□□□□ -1.4
HMGB1P49-201ENST00000418882 FOXS1O43638 330 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 BRINP1O60477 761 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 LPLP06858 475 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 CDKN1CP49918 316 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 SESN3P58005 492 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 TCTN3Q6NUS6 607 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 KLHDC10Q6PID8 442 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 CLEC14AQ86T13 490 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms