RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MRPL38Q96DV4 380 aaKnown RBP18.45■□□□□ 0.54
LINC00404-201ENST00000418660 DYDC2Q96IM9 177 aa18.45■□□□□ 0.54
LINC00404-201ENST00000418660 ZNF668Q96K58 619 aaPredicted RBP18.45■□□□□ 0.54
LINC00404-201ENST00000418660 SCLT1Q96NL6 688 aa18.45■□□□□ 0.54
LINC00404-201ENST00000418660 ASB2Q96Q27 587 aa18.45■□□□□ 0.54
LINC00404-201ENST00000418660 MTMR9Q96QG7 549 aa18.45■□□□□ 0.54
LINC00404-201ENST00000418660 LXNQ9BS40 222 aa18.45■□□□□ 0.54
LINC00404-201ENST00000418660 FOXP1Q9H334 677 aaPredicted RBP18.45■□□□□ 0.54
LINC00404-201ENST00000418660 ZSWIM4Q9H7M6 989 aa18.45■□□□□ 0.54
LINC00404-201ENST00000418660 TTC12Q9H892 705 aaPredicted RBP18.45■□□□□ 0.54
LINC00404-201ENST00000418660 SUCLA2Q9P2R7 463 aaPredicted RBP18.45■□□□□ 0.54
LINC00404-201ENST00000418660 SLITRK3O94933 977 aa18.44■□□□□ 0.54
LINC00404-201ENST00000418660 YWHABP31946 246 aaKnown RBP18.44■□□□□ 0.54
LINC00404-201ENST00000418660 TXKP42681 527 aa18.44■□□□□ 0.54
LINC00404-201ENST00000418660 NPEPPSP55786 919 aa18.44■□□□□ 0.54
LINC00404-201ENST00000418660 CEP170P1Q96L14 293 aa18.44■□□□□ 0.54
LINC00404-201ENST00000418660 GCOM2Q9BZD3 368 aaPredicted RBP18.44■□□□□ 0.54
LINC00404-201ENST00000418660 COG5Q9UP83 839 aa18.44■□□□□ 0.54
LINC00404-201ENST00000418660 PRRC2BQ5JSZ5 2229 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 UNC80Q8N2C7 3258 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 ZSCAN20P17040 1043 aaPredicted RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 ATP2B1P20020 1258 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 IBSPP21815 317 aaPredicted RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 RFC5P40937 340 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 CYP4A11Q02928 519 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 CTTNQ14247 550 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 ZNF410Q86VK4 478 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 RHPN2Q8IUC4 686 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 TPH2Q8IWU9 490 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 ZNF579Q8NAF0 562 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 NEK9Q8TD19 979 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 SLC7A3Q8WY07 619 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 HSD17B14Q9BPX1 270 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 EIF2AK1Q9BQI3 630 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 C11orf84Q9BUA3 381 aaPredicted RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 PLVAPQ9BX97 442 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 DHX33Q9H6R0 707 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 ELAC1Q9H777 363 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 TMEM161AQ9NX61 479 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 MRPL42Q9Y6G3 142 aaKnown RBP18.43■□□□□ 0.54
LINC00404-201ENST00000418660 TRANK1O15050 2925 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 RALGAPA2Q2PPJ7 1873 aa18.43■□□□□ 0.54
LINC00404-201ENST00000418660 MCM7P33993 719 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 GATMP50440 423 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 POLGP54098 1239 aaPredicted RBP18.42■□□□□ 0.54
LINC00404-201ENST00000418660 ORC2Q13416 577 aaPredicted RBP18.42■□□□□ 0.54
LINC00404-201ENST00000418660 AAK1Q2M2I8 961 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 PAN2Q504Q3 1202 aaKnown RBP18.42■□□□□ 0.54
LINC00404-201ENST00000418660 HLA-CQ95604 372 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 INO80BQ9C086 356 aaPredicted RBP18.42■□□□□ 0.54
LINC00404-201ENST00000418660 LMAN2LQ9H0V9 348 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 TMEM60Q9H2L4 133 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
LINC00404-201ENST00000418660 A0A087WZ62 844 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 ZBTB39O15060 712 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 LYPLA2O95372 231 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
LINC00404-201ENST00000418660 TIGD5Q53EQ6 642 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 NAALADL2Q58DX5 795 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 XKR9Q5GH70 373 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 P2RX5Q93086 422 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 FDXACB1Q9BRP7 624 aaPredicted RBP18.41■□□□□ 0.54
LINC00404-201ENST00000418660 NLRC5Q86WI3 1866 aa18.41■□□□□ 0.54
LINC00404-201ENST00000418660 GAS2O43903 313 aaKnown RBP18.4■□□□□ 0.54
LINC00404-201ENST00000418660 FGFR4P22455 802 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 TFF2Q03403 129 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 ZNF174Q15697 407 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 KSR1Q8IVT5 923 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 TCP11Q8WWU5 503 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 NLRP4Q96MN2 994 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 TBC1D32Q96NH3 1257 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 CHST12Q9NRB3 414 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 ANKEF1Q9NU02 776 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 COL4A3BPQ9Y5P4 624 aa18.4■□□□□ 0.54
LINC00404-201ENST00000418660 TBKBP1A7MCY6 615 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 GRM6O15303 877 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 CSDE1O75534 798 aaKnown RBP18.39■□□□□ 0.53
LINC00404-201ENST00000418660 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00404-201ENST00000418660 U2AF2P26368 475 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00404-201ENST00000418660 TRAPPC10P48553 1259 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 MCM2P49736 904 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 TTC38Q5R3I4 469 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 ECHDC2Q86YB7 292 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 PRPF31Q8WWY3 499 aaKnown RBP18.39■□□□□ 0.53
LINC00404-201ENST00000418660 PSPC1Q8WXF1 523 aaKnown RBP18.39■□□□□ 0.53
LINC00404-201ENST00000418660 TMEM143Q96AN5 459 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 DACT1Q9NYF0 836 aa18.39■□□□□ 0.53
LINC00404-201ENST00000418660 NOL7Q9UMY1 257 aaKnown RBP18.39■□□□□ 0.53
LINC00404-201ENST00000418660 PRUNE2Q8WUY3 3088 aa18.38■□□□□ 0.53
LINC00404-201ENST00000418660 A0A0U1RQF3 1178 aa18.38■□□□□ 0.53
LINC00404-201ENST00000418660 POTEMA6NI47 508 aa18.38■□□□□ 0.53
LINC00404-201ENST00000418660 ASAP2O43150 1006 aa18.38■□□□□ 0.53
LINC00404-201ENST00000418660 HOXA2O43364 376 aa18.38■□□□□ 0.53
LINC00404-201ENST00000418660 FGFR1P11362 822 aa18.38■□□□□ 0.53
LINC00404-201ENST00000418660 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
LINC00404-201ENST00000418660 EMC2Q15006 297 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms