RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 GCNT3O95395 438 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 AKR1A1P14550 325 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 SMPD1P17405 629 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 EFNA5P52803 228 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 POLGP54098 1239 aaPredicted RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 TRIM14Q14142 442 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 PCBP1Q15365 356 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 HAUS6Q7Z4H7 955 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 IRF2BP1Q8IU81 584 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 NUP58Q9BVL2 599 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 KATNAL1Q9BW62 490 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 XPO4Q9C0E2 1151 aaKnown RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 ZHX3Q9H4I2 956 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 DMAC2Q9NW81 257 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 IFNKQ9P0W0 207 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 MAPK8IP1Q9UQF2 711 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 DAAM1Q9Y4D1 1078 aa11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGA1P6-201ENST00000418454 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 USO1O60763 962 aaKnown RBP11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 NPTX2P47972 431 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 PMS1P54277 932 aaKnown RBP11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 NPEPPSP55786 919 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 STX17P56962 302 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 POU5F1Q01860 360 aaKnown RBP11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 TBC1D8BQ0IIM8 1120 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 ADAM9Q13443 819 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 PLCB4Q15147 1175 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 FIGNQ5HY92 759 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 SPECC1LQ69YQ0 1117 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 LRRC55Q6ZSA7 311 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 TUBGCP2Q9BSJ2 902 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 EDEM3Q9BZQ6 932 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 AP5M1Q9H0R1 490 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 C2orf40Q9H1Z8 148 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 KIAA1586Q9HCI6 787 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
HMGA1P6-201ENST00000418454 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 LGALS16A8MUM7 142 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 H3BRB1 525 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 N4BP3O15049 544 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 PMM2O15305 246 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 TGFB1I1O43294 461 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 NRDCO43847 1150 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 ZEB2O60315 1214 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 PIGRP01833 764 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 LGALS2P05162 132 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 MMP3P08254 477 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 CYP2B6P20813 491 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 GARTP22102 1010 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 TMOD1P28289 359 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 HOXD13P35453 343 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 PBX1P40424 430 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 COPB1P53618 953 aaKnown RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 GJA9P57773 515 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 TFDP1Q14186 410 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 EMC2Q15006 297 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 KRT31Q15323 416 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 MAN2A1Q16706 1144 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 SLFN12LQ6IEE8 588 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 USP37Q86T82 979 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 IFNLR1Q8IU57 520 aaPredicted RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 MAP4K3Q8IVH8 894 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 DRC7Q8IY82 874 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 TMEM161BQ8NDZ6 487 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 CCDC51Q96ER9 411 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 NAP1L5Q96NT1 182 aaPredicted RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 SEZ6LQ9BYH1 1024 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 TUT1Q9H6E5 874 aaKnown RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 SPC25Q9HBM1 224 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 XPNPEP1Q9NQW7 623 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 ARHGAP28Q9P2N2 729 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 TBX20Q9UMR3 447 aa11.11□□□□□ -0.63
HMGA1P6-201ENST00000418454 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
HMGA1P6-201ENST00000418454 GTPBP10A4D1E9 387 aaKnown RBP11.1□□□□□ -0.63
HMGA1P6-201ENST00000418454 SFI1A8K8P3 1242 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms