RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 MCOLN1Q9GZU1 580 aa6.66□□□□□ -1.34
RFC4-204ENST00000417876 MTG2Q9H4K7 406 aa6.66□□□□□ -1.34
RFC4-204ENST00000417876 VSTM5A8MXK1 200 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 IGFBP6P24592 240 aaPredicted RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 ITGA1P56199 1179 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 ANTXR2P58335 489 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 CCT2P78371 535 aaKnown RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 CDK17Q00537 523 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 STILQ15468 1287 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 RRP12Q5JTH9 1297 aaKnown RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 MPZL3Q6UWV2 235 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 B3GNT9Q6UX72 402 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 ZC3H18Q86VM9 953 aaKnown RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 IGDCC3Q8IVU1 814 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 AUTS2Q8WXX7 1259 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 RAX2Q96IS3 184 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 DIRC2Q96SL1 478 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 PITHD1Q9GZP4 211 aaPredicted RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 RNF38Q9H0F5 515 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 WNT8AQ9H1J5 351 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 OR10A5Q9H207 317 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 DLL4Q9NR61 685 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 OBP2AQ9NY56 170 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 ARHGAP20Q9P2F6 1191 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 USP18Q9UMW8 372 aa6.65□□□□□ -1.34
RFC4-204ENST00000417876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
RFC4-204ENST00000417876 BIN1O00499 593 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 OPHN1O60890 802 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 EPHB3P54753 998 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 CD83Q01151 205 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 GTF2H3Q13889 308 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 GFOD2Q3B7J2 385 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 GAREM2Q75VX8 874 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 B3GNT8Q7Z7M8 397 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 STPG3Q8N7X2 389 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 CALML6Q8TD86 181 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 CLIP3Q96DZ5 547 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 ZSWIM3Q96MP5 696 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 AIFM3Q96NN9 605 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 SLC12A5Q9H2X9 1139 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 NSUN3Q9H649 340 aaKnown RBP6.64□□□□□ -1.35
RFC4-204ENST00000417876 IFT122Q9HBG6 1241 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 GCM1Q9NP62 436 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 SIRT5Q9NXA8 310 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
RFC4-204ENST00000417876 MAGEL2Q9UJ55 1249 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 ZFP69BQ9UJL9 534 aa6.64□□□□□ -1.35
RFC4-204ENST00000417876 A0A0A6YYJ9 748 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 A0A0A6YYK5 440 aaPredicted RBP6.63□□□□□ -1.35
RFC4-204ENST00000417876 ST20-MTHFSA0A0A6YYL1 179 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 GOLGA6CA6NDK9 693 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 GOLGA6BA6NDN3 693 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 PEX10O60683 326 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 GOLGA6DP0CG33 693 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 CYP2C8P10632 490 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 APEX1P27695 318 aaKnown RBP6.63□□□□□ -1.35
RFC4-204ENST00000417876 BCAR1P56945 870 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 ZNF267Q14586 743 aaPredicted RBP6.63□□□□□ -1.35
RFC4-204ENST00000417876 OLFML2BQ68BL8 750 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 CATIPQ7Z7H3 387 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 BCL6BQ8N143 479 aaPredicted RBP6.63□□□□□ -1.35
RFC4-204ENST00000417876 MZB1Q8WU39 189 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 SSH1Q8WYL5 1049 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 COA7Q96BR5 231 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 SOX7Q9BT81 388 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 C11orf84Q9BUA3 381 aaPredicted RBP6.63□□□□□ -1.35
RFC4-204ENST00000417876 KCND1Q9NSA2 647 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 GOLGA6AQ9NYA3 693 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 FTSJ1Q9UET6 329 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 DDX20Q9UHI6 824 aaKnown RBP6.63□□□□□ -1.35
RFC4-204ENST00000417876 CDY2AQ9Y6F7 541 aa6.63□□□□□ -1.35
RFC4-204ENST00000417876 EIF4G1Q04637 1599 aaKnown RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 POU2F2P09086 479 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 MTHFD2P13995 350 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 ADKP55263 362 aaKnown RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 FOXO4P98177 505 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 PPARAQ07869 468 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 GALEQ14376 348 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 TARBP2Q15633 366 aaKnown RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 MINDY4Q4G0A6 757 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 MBNL2Q5VZF2 373 aaKnown RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 OR14C36Q8NHC7 312 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 SLC35G2Q8TBE7 412 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 GAB3Q8WWW8 586 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 CCDC136Q96JN2 1154 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 TMEM209Q96SK2 561 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 FDXACB1Q9BRP7 624 aaPredicted RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 GTPBP4Q9BZE4 634 aaKnown RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 HAPLN2Q9GZV7 340 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 ARNT2Q9HBZ2 717 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 DCP1AQ9NPI6 582 aaPredicted RBP6.62□□□□□ -1.35
RFC4-204ENST00000417876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.62□□□□□ -1.35
RFC4-204ENST00000417876 LIMCH1Q9UPQ0 1083 aa6.62□□□□□ -1.35
RFC4-204ENST00000417876 TEX51A0A1B0GUA7 166 aa6.61□□□□□ -1.35
RFC4-204ENST00000417876 N4BP3O15049 544 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms