RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 AP3B2Q13367 1082 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 WWC2Q6AWC2 1192 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MCTP2Q6DN12 878 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ERMP1Q7Z2K6 904 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MICU3Q86XE3 530 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ECHDC2Q86YB7 292 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RAB11FIP4Q86YS3 637 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF713Q8N859 430 aaPredicted RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TDRD5Q8NAT2 981 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RNF169Q8NCN4 708 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PGBD1Q96JS3 809 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MAP7D2Q96T17 732 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TBC1D22BQ9NU19 505 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DZANK1Q9NVP4 752 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RBM28Q9NW13 759 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TCEAL9Q9UHQ7 104 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CDH22Q9UJ99 828 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DBR1Q9UK59 544 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 AKT3Q9Y243 479 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 USTQ9Y2C2 406 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MAFBQ9Y5Q3 323 aaPredicted RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 V9GY48 417 aaPredicted RBP8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 USP34Q70CQ2 3546 aa8.92□□□□□ -0.98
HLA-DPA1-241ENST00000417724 A0A0U1RQF3 1178 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FAM86B1E9PN63 330 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ASGR2P07307 311 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PSAPP07602 524 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FAM86B2P0C5J1 330 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 BCAR1P56945 870 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 GIT2Q14161 759 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RARS2Q5T160 578 aaKnown RBP8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TYW1BQ6NUM6 668 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF746Q6NUN9 644 aaPredicted RBP8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 EFCAB12Q6NXP0 572 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TRMT1LQ7Z2T5 733 aaKnown RBP8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FRMD5Q7Z6J6 570 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SGMS1Q86VZ5 419 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SMAP1Q8IYB5 467 aaPredicted RBP8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SLC39A11Q8N1S5 342 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 EXOC6Q8TAG9 804 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RSPH1Q8WYR4 309 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ACSF2Q96CM8 615 aaPredicted RBP8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 TMEM169Q96HH4 297 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 FAM167AQ96KS9 214 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF577Q9BSK1 485 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 MRPL9Q9BYD2 267 aaKnown RBP8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ADAMTS10Q9H324 1103 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CYP26B1Q9NR63 512 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 NRBP2Q9NSY0 501 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 RNF19AQ9NV58 838 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DACT1Q9NYF0 836 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 PCDHA10Q9Y5I2 948 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 WDR81Q562E7 1941 aa8.91□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SLC27A2O14975 620 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CYP3A4P08684 503 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 WEE2P0C1S8 567 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 DARSP14868 501 aaKnown RBP8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ID4P47928 161 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 METAP2P50579 478 aaKnown RBP eCLIP8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CLCN3P51790 818 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 POLGP54098 1239 aaPredicted RBP8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CDC42EP1Q00587 391 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CLLU1OSQ5K130 101 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 KIAA1841Q6NSI8 718 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 APOA5Q6Q788 366 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 OTOP3Q7RTS5 596 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ZNF598Q86UK7 904 aaKnown RBP8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 ADSSL1Q8N142 457 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 C12orf76Q8N812 135 aaPredicted RBP8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 HELQQ8TDG4 1101 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SCLT1Q96NL6 688 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 LRRC2Q9BYS8 371 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SMOC2Q9H3U7 446 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CHST12Q9NRB3 414 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 BARHL2Q9NY43 387 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 GABBR1Q9UBS5 961 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 SAMM50Q9Y512 469 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 IRAK3Q9Y616 596 aa8.9□□□□□ -0.98
HLA-DPA1-241ENST00000417724 CNTNAP5Q8WYK1 1306 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GVINP1Q7Z2Y8 2422 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 IGLV3-22A0A075B6J6 115 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NT5C1B-RDH14C9J2C7 533 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZBTB43O43298 467 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SKIP12755 728 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SETQ01105 290 aaPredicted RBP8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FUT2Q10981 343 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TDGQ13569 410 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RTN1Q16799 776 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 JAKMIP3Q5VZ66 844 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KANK3Q6NY19 840 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DDX53Q86TM3 631 aaKnown RBP8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CABP7Q86V35 215 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PPFIBP1Q86W92 1011 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FLCNQ8NFG4 579 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SLC22A17Q8WUG5 538 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CRYGNQ8WXF5 182 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms