RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 FAM193AP78312 1265 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
SGCE-202ENST00000415788 MARCH8Q5T0T0 291 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 TAF2Q6P1X5 1199 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 PADI6Q6TGC4 694 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 ANKRD33Q7Z3H0 272 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 CEP57L1Q8IYX8 460 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
SGCE-202ENST00000415788 LRRC27Q9C0I9 530 aa16.08■□□□□ 0.16
SGCE-202ENST00000415788 DHX33Q9H6R0 707 aaKnown RBP16.08■□□□□ 0.16
SGCE-202ENST00000415788 A0A087WWV3 80 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
SGCE-202ENST00000415788 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
SGCE-202ENST00000415788 ZNF202O95125 648 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 C22orf31O95567 290 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 SSBP05455 408 aaKnown RBP eCLIP16.07■□□□□ 0.16
SGCE-202ENST00000415788 SLFN14P0C7P3 912 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 KLRC1P26715 233 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
SGCE-202ENST00000415788 AMPD3Q01432 767 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 CAMK4Q16566 473 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 PTGISQ16647 500 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 GDF6Q6KF10 455 aaPredicted RBP16.07■□□□□ 0.16
SGCE-202ENST00000415788 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 SV2BQ7L1I2 683 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 FMR1NBQ8N0W7 255 aaPredicted RBP16.07■□□□□ 0.16
SGCE-202ENST00000415788 MCPH1Q8NEM0 835 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 LRRC15Q8TF66 581 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 MRFAP1L1Q96HT8 127 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 TIPINQ9BVW5 301 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 ATP6V0A4Q9HBG4 840 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 PCDHA2Q9Y5H9 948 aa16.07■□□□□ 0.16
SGCE-202ENST00000415788 IGKV6-21A0A0C4DH24 114 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 CYP11B2P19099 503 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 TMOD1P28289 359 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 MCM6Q14566 821 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 TRAPPC12Q8WVT3 735 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 MTRQ99707 1265 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 SH2D3AQ9BRG2 576 aa16.06■□□□□ 0.16
SGCE-202ENST00000415788 SMIM35A0A1B0GVV1 85 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 DCDC2CA8MYV0 355 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 B4GALT4O60513 344 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 USO1O60763 962 aaKnown RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 DNM2P50570 870 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 LRMPQ12912 555 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 HIC1Q14526 733 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 EMC2Q15006 297 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 CEP135Q66GS9 1140 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 SERINC5Q86VE9 423 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 PPP1R13LQ8WUF5 828 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 KCND1Q9NSA2 647 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 KIF2AO00139 706 aaPredicted RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 TREHO43280 583 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 ACTN4O43707 911 aaKnown RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 CD4P01730 458 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 RTP1P59025 263 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 PTK7Q13308 1070 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 TRIM60Q495X7 471 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 RINT1Q6NUQ1 792 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 EFCAB12Q6NXP0 572 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 C1orf186Q6ZWK4 172 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 CNNM3Q8NE01 707 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 TCP11Q8WWU5 503 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 PDLIM7Q9NR12 457 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
SGCE-202ENST00000415788 SERTAD1Q9UHV2 236 aa16.05■□□□□ 0.16
SGCE-202ENST00000415788 WDR81Q562E7 1941 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 GOLGA6L19H0YKK7 550 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
SGCE-202ENST00000415788 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
SGCE-202ENST00000415788 CAND2O75155 1236 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 MYL1P05976 194 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 CYP2C9P11712 490 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
SGCE-202ENST00000415788 LRRC26Q2I0M4 334 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 LONRF3Q496Y0 759 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 KRBA2Q6ZNG9 492 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
SGCE-202ENST00000415788 RPAINQ86UA6 219 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 RSPH3Q86UC2 560 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 LINC01465Q8N7H1 131 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 CACTINQ8WUQ7 758 aaKnown RBP16.04■□□□□ 0.16
SGCE-202ENST00000415788 HTATIP2Q9BUP3 242 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
SGCE-202ENST00000415788 NR1I2O75469 434 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 CDC42EP1Q00587 391 aa16.03■□□□□ 0.16
SGCE-202ENST00000415788 DHX8Q14562 1220 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms