RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 NECTIN4Q96NY8 510 aa17.45■□□□□ 0.38
DDX56-202ENST00000415758 ZMYND12Q9H0C1 365 aa17.45■□□□□ 0.38
DDX56-202ENST00000415758 ADAM7Q9H2U9 754 aa17.45■□□□□ 0.38
DDX56-202ENST00000415758 ANO2Q9NQ90 1003 aa17.45■□□□□ 0.38
DDX56-202ENST00000415758 ZFHX2Q9C0A1 2572 aaPredicted RBP17.45■□□□□ 0.38
DDX56-202ENST00000415758 CFAP54Q96N23 3096 aa17.45■□□□□ 0.38
DDX56-202ENST00000415758 A0A0U1RQF3 1178 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 C2orf71A6NGG8 1288 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 EOMESO95936 686 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 TMOD1P28289 359 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 CDC27P30260 824 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 PFKFB3Q16875 520 aaPredicted RBP17.44■□□□□ 0.38
DDX56-202ENST00000415758 LLGL2Q6P1M3 1020 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 ZNF598Q86UK7 904 aaKnown RBP17.44■□□□□ 0.38
DDX56-202ENST00000415758 UBALD2Q8IYN6 164 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 ABI1Q8IZP0 508 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 FAM167AQ96KS9 214 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 HCFC2Q9Y5Z7 792 aa17.44■□□□□ 0.38
DDX56-202ENST00000415758 PROB1E7EW31 1015 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 GFRA3O60609 400 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 CIITAP33076 1130 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 PBX3P40426 434 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 CLCN3P51790 818 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 SMC1AQ14683 1233 aaKnown RBP17.43■□□□□ 0.38
DDX56-202ENST00000415758 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 CES5AQ6NT32 575 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 SLC39A11Q8N1S5 342 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 KREMEN2Q8NCW0 462 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 APOL5Q9BWW9 433 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 GABBR1Q9UBS5 961 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 SORCS3Q9UPU3 1222 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 AKT3Q9Y243 479 aa17.43■□□□□ 0.38
DDX56-202ENST00000415758 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 GOLGA8BA8MQT2 603 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 PDGFBP01127 241 aaPredicted RBP17.42■□□□□ 0.38
DDX56-202ENST00000415758 DARSP14868 501 aaKnown RBP17.42■□□□□ 0.38
DDX56-202ENST00000415758 MTMR3Q13615 1198 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
DDX56-202ENST00000415758 ZBTB33Q86T24 672 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 RSPH1Q8WYR4 309 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 ATOH1Q92858 354 aaPredicted RBP17.42■□□□□ 0.38
DDX56-202ENST00000415758 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 POMKQ9H5K3 350 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 NRBP2Q9NSY0 501 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 FAM86C1Q9NVL1 165 aa17.42■□□□□ 0.38
DDX56-202ENST00000415758 ADAMTS3O15072 1205 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 GALR2O43603 387 aaPredicted RBP17.41■□□□□ 0.38
DDX56-202ENST00000415758 ZNF862O60290 1169 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 CLASP2O75122 1294 aaKnown RBP17.41■□□□□ 0.38
DDX56-202ENST00000415758 ADD1P35611 737 aaKnown RBP17.41■□□□□ 0.38
DDX56-202ENST00000415758 MTHFRP42898 656 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 GPC3P51654 580 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 PRR16Q569H4 304 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 LRRC71Q8N4P6 559 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 LENG9Q96B70 501 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 YTHDC1Q96MU7 727 aaKnown RBP17.41■□□□□ 0.38
DDX56-202ENST00000415758 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 MRPL9Q9BYD2 267 aaKnown RBP17.41■□□□□ 0.38
DDX56-202ENST00000415758 C6orf50Q9HD87 102 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 TCEAL9Q9UHQ7 104 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 IRAK3Q9Y616 596 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 PLXNA3P51805 1871 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 DMDP11532 3685 aa17.41■□□□□ 0.38
DDX56-202ENST00000415758 PTPRZ1P23471 2315 aaPredicted RBP17.4■□□□□ 0.38
DDX56-202ENST00000415758 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 CCDC196A0A1B0GTZ2 297 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 CARNS1A5YM72 827 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 WDR64B1ANS9 1081 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 C2CD4DB7Z1M9 353 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 BRD1O95696 1058 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 OATP04181 439 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 SP100P23497 879 aaPredicted RBP17.4■□□□□ 0.38
DDX56-202ENST00000415758 GNA11P29992 359 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 ALDH7A1P49419 539 aaKnown RBP17.4■□□□□ 0.38
DDX56-202ENST00000415758 BMS1Q14692 1282 aaKnown RBP17.4■□□□□ 0.38
DDX56-202ENST00000415758 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
DDX56-202ENST00000415758 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
DDX56-202ENST00000415758 CHST12Q9NRB3 414 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 CDH22Q9UJ99 828 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
DDX56-202ENST00000415758 H0Y858 1186 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 CXCL14O95715 111 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 BCAR1P56945 870 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
DDX56-202ENST00000415758 RNF169Q8NCN4 708 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 HELQQ8TDG4 1101 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 RIT2Q99578 217 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 DISC1Q9NRI5 854 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 USTQ9Y2C2 406 aa17.39■□□□□ 0.37
DDX56-202ENST00000415758 PRPF3O43395 683 aaKnown RBP17.38■□□□□ 0.37
DDX56-202ENST00000415758 EDIL3O43854 480 aa17.38■□□□□ 0.37
DDX56-202ENST00000415758 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
DDX56-202ENST00000415758 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms