RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
RFFL-205ENST00000415395 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 ACRBPQ8NEB7 543 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 FGD4Q96M96 766 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 DNAJC7Q99615 494 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 TSG101Q99816 390 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 PTPN18Q99952 460 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 PORCNQ9H237 461 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 UBE4BO95155 1302 aa12.7□□□□□ -0.38
RFFL-205ENST00000415395 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 FAM13AO94988 1023 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 ATG7O95352 703 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 SLC10A3P09131 477 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 MAPK4P31152 587 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 YWHABP31946 246 aaKnown RBP12.69□□□□□ -0.38
RFFL-205ENST00000415395 ACTN2P35609 894 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 RARRES1P49788 294 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 PMS1P54277 932 aaKnown RBP12.69□□□□□ -0.38
RFFL-205ENST00000415395 ACTR2P61160 394 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 BMT2Q1RMZ1 405 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 WDR78Q5VTH9 848 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 ABHD15Q6UXT9 468 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 OTUD6AQ7L8S5 288 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 KIAA1328Q86T90 577 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 DUSP9Q99956 384 aaKnown RBP12.69□□□□□ -0.38
RFFL-205ENST00000415395 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
RFFL-205ENST00000415395 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 VPS18Q9P253 973 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 CAPN11Q9UMQ6 739 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 DIS3Q9Y2L1 958 aaKnown RBP12.69□□□□□ -0.38
RFFL-205ENST00000415395 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 MCM3APO60318 1980 aa12.69□□□□□ -0.38
RFFL-205ENST00000415395 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.38
RFFL-205ENST00000415395 RPS6KA5O75582 802 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ARHGAP25P42331 645 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 AMPD2Q01433 879 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 CASP8Q14790 479 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ANKRD40Q6AI12 368 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 SEPT14Q6ZU15 432 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 STXBP4Q6ZWJ1 553 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 EPM2AIP1Q7L775 607 aaPredicted RBP12.68□□□□□ -0.38
RFFL-205ENST00000415395 SFR1Q86XK3 245 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 HPS3Q969F9 1004 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 CCDC43Q96MW1 224 aaKnown RBP12.68□□□□□ -0.38
RFFL-205ENST00000415395 SEMA6BQ9H3T3 888 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ABCB6Q9NP58 842 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ADGRA2Q96PE1 1338 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 IGSF9BQ9UPX0 1349 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 PGK2P07205 417 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 RHOXF2BP0C7M4 288 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 MAPTP10636 758 aaKnown RBP12.68□□□□□ -0.38
RFFL-205ENST00000415395 UBA1P22314 1058 aaKnown RBP12.68□□□□□ -0.38
RFFL-205ENST00000415395 SP2Q02086 613 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
RFFL-205ENST00000415395 FSTL1Q12841 308 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 UGCGQ16739 394 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ZCWPW2Q504Y3 356 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 PADI6Q6TGC4 694 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 METTL7BQ6UX53 244 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 PNKPQ96T60 521 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 RHOXF2Q9BQY4 288 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
RFFL-205ENST00000415395 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 H3BQF6 201 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 PES1O00541 588 aaKnown RBP12.67□□□□□ -0.38
RFFL-205ENST00000415395 ZBTB39O15060 712 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
RFFL-205ENST00000415395 ADORA2AP29274 412 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
RFFL-205ENST00000415395 CDK17Q00537 523 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 RAD51AP2Q09MP3 1159 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 ALCAMQ13740 583 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 GRB14Q14449 540 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 FIGNQ5HY92 759 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 CCDC122Q5T0U0 273 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
RFFL-205ENST00000415395 CYFIP1Q7L576 1253 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 IRF2BP1Q8IU81 584 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 SCFD1Q8WVM8 642 aa12.67□□□□□ -0.38
RFFL-205ENST00000415395 JAKMIP2Q96AA8 810 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms