RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 HOOK2Q96ED9 719 aa5.67□□□□□ -1.5
PTPRK-210ENST00000415055 LBHD1Q9BQE6 289 aaPredicted RBP5.67□□□□□ -1.5
PTPRK-210ENST00000415055 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRK-210ENST00000415055 C11orf49Q9H6J7 331 aa5.67□□□□□ -1.5
PTPRK-210ENST00000415055 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
PTPRK-210ENST00000415055 MAP3K2Q9Y2U5 619 aa5.67□□□□□ -1.5
PTPRK-210ENST00000415055 CAPN6Q9Y6Q1 641 aa5.67□□□□□ -1.5
PTPRK-210ENST00000415055 CLSPNQ9HAW4 1339 aa5.67□□□□□ -1.5
PTPRK-210ENST00000415055 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 ANKRD18BA2A2Z9 1011 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 RAB11FIP3O75154 756 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 FRAT2O75474 233 aaPredicted RBP5.66□□□□□ -1.5
PTPRK-210ENST00000415055 PGRP06401 933 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 IL1R1P14778 569 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 FOSL2P15408 326 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 CAPN2P17655 700 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 PLA2G5P39877 138 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 FKBP1AP62942 108 aaKnown RBP5.66□□□□□ -1.5
PTPRK-210ENST00000415055 PPATQ06203 517 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 CHAF1AQ13111 956 aaPredicted RBP5.66□□□□□ -1.5
PTPRK-210ENST00000415055 EEPD1Q7L9B9 569 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 HID1Q8IV36 788 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 LRRC56Q8IYG6 542 aaPredicted RBP5.66□□□□□ -1.5
PTPRK-210ENST00000415055 ZSWIM2Q8NEG5 633 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 MYLIPQ8WY64 445 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 CDX2Q99626 313 aaPredicted RBP5.66□□□□□ -1.5
PTPRK-210ENST00000415055 ZNF341Q9BYN7 854 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 GMIPQ9P107 970 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 REV1Q9UBZ9 1251 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 KLHL3Q9UH77 587 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 ST14Q9Y5Y6 855 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 MUC3AQ02505 3323 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 FAM205AQ6ZU69 1335 aa5.66□□□□□ -1.5
PTPRK-210ENST00000415055 CDH23Q9H251 3354 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 PI4KAP2A4QPH2 592 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 DNAJA2O60884 412 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 DDAH1O94760 285 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 GJB6O95452 261 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 HMGCRP04035 888 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 CCNFP41002 786 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 ZNF143P52747 638 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-210ENST00000415055 GYS2P54840 703 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 TCP10Q12799 353 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 PPP2R5EQ16537 467 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 NKG7Q16617 165 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 TMEM201Q5SNT2 666 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 CDCP2Q5VXM1 449 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 LARP1BQ659C4 914 aaKnown RBP5.65□□□□□ -1.5
PTPRK-210ENST00000415055 FAM109BQ6ICB4 259 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-210ENST00000415055 LETMD1Q6P1Q0 360 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 RUFY4Q6ZNE9 571 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 TTC6Q86TZ1 520 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 C1QL4Q86Z23 238 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 FAM178BQ8IXR5 827 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 PI4KAP1Q8N8J0 262 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 FBXO15Q8NCQ5 510 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-210ENST00000415055 TEKT1Q969V4 418 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 COX4I2Q96KJ9 171 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 ALPK1Q96QP1 1244 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 ST7Q9NRC1 585 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 CNNM1Q9NRU3 951 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 ADAM30Q9UKF2 790 aa5.65□□□□□ -1.5
PTPRK-210ENST00000415055 CACNA1FO60840 1977 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 ESYT3A0FGR9 886 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 FAM86C2PA6NEL3 165 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 UPK3BL1B0FP48 263 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 UPK3BL2E5RIL1 263 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 NFIBO00712 420 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 CBX7O95931 251 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 CST3P01034 146 aaPredicted RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 IGKV5-2P06315 115 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 NAT2P11245 290 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 CYP7A1P22680 504 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 HIBADHP31937 336 aaKnown RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 KIR3DL1P43629 444 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 GYG1P46976 350 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 IFIT5Q13325 482 aaKnown RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 BBS9Q3SYG4 887 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 FASTKD5Q7L8L6 764 aaKnown RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 SIAH1Q8IUQ4 282 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 LRRC47Q8N1G4 583 aaKnown RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 ANKRD13CQ8N6S4 541 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 RIN3Q8TB24 985 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 PPM1EQ8WY54 764 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 UBE2FQ969M7 185 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 SGSM3Q96HU1 749 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 DPH2Q9BQC3 489 aaPredicted RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 NSUN3Q9H649 340 aaKnown RBP5.64□□□□□ -1.51
PTPRK-210ENST00000415055 FRMPD3Q5JV73 1810 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 DOCK2Q92608 1830 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 MYH2Q9UKX2 1941 aa5.64□□□□□ -1.51
PTPRK-210ENST00000415055 DOCK1Q14185 1865 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 CHURC1-FNTBB4DL54 471 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 TNFRSF10CO14798 259 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 MARCH6O60337 910 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 C1QTNF9P0C862 333 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 MAP3K12Q12852 859 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 SQSTM1Q13501 440 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 LRRC26Q2I0M4 334 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 CCDC30Q5VVM6 783 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms