RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MTMR1Q13613 665 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 CCDC178Q5BJE1 867 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 LYSMD2Q8IV50 215 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 SLC41A1Q8IVJ1 513 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 CBARPQ8N350 705 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 HOMER2Q9NSB8 354 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 C14orf119Q9NWQ9 140 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 VWA7Q9Y334 891 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 MYPNQ86TC9 1320 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 ENPP1P22413 925 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 KCNQ1P51787 676 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 ANTXR2P58335 489 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 EXOSC10Q01780 885 aaKnown RBP5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 USP10Q14694 798 aaKnown RBP5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 SYDE2Q5VT97 1194 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 FAM124AQ86V42 546 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 PPP1R14CQ8TAE6 165 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 NKD2Q969F2 451 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 ANO3Q9BYT9 981 aa5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 DDX56Q9NY93 547 aaKnown RBP5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 SAE1Q9UBE0 346 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P11-201ENST00000413899 TRIM75PA6NK02 468 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 GOLGA8AA7E2F4 631 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 GOLGA8BA8MQT2 603 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 KATNA1O75449 491 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 GPR3P46089 330 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 SESN2P58004 480 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 FAM50AQ14320 339 aaKnown RBP5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 UGT8Q16880 541 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 BRDTQ58F21 947 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 PITRM1Q5JRX3 1037 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 NT5DC1Q5TFE4 455 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 CCDC62Q6P9F0 684 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 BORAQ6PGQ7 559 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 LARP4Q71RC2 724 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 ANKRD13AQ8IZ07 590 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 CDYL2Q8N8U2 506 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 STAG1Q8WVM7 1258 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 DYDC2Q96IM9 177 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 RAX2Q96IS3 184 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 HIST1H2AHQ96KK5 128 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 HIST1H2AJQ99878 128 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 NOL10Q9BSC4 688 aaKnown RBP5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 OSBPL6Q9BZF3 934 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 POLR3BQ9NW08 1133 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 CDC42EP3Q9UKI2 254 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 SYNPO2Q9UMS6 1093 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 PCDHB6Q9Y5E3 794 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 WASHC2AQ641Q2 1341 aa5.22□□□□□ -1.57
HMGB1P11-201ENST00000413899 A0A0A6YYK5 440 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 GABRDO14764 452 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 B4GALT3O60512 393 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SEC24DO94855 1032 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SASH1O94885 1247 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 PCDH8O95206 1070 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 CLEC2LP0C7M8 214 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 ZNF888P0CJ79 500 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SCAND1P57086 179 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 KRT85P78386 507 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 MRPS9P82933 396 aaKnown RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 PCOLCEQ15113 449 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 CT83Q5H943 113 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 ZMAT1Q5H9K5 638 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 KLHDC10Q6PID8 442 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 FRMD5Q7Z6J6 570 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 RALYLQ86SE5 291 aaKnown RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 FERMT3Q86UX7 667 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 CMIPQ8IY22 773 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 KBTBD2Q8IY47 623 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 LGI4Q8N135 537 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 GFM2Q969S9 779 aaKnown RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 EAF2Q96CJ1 260 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SOX7Q9BT81 388 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 ASPSCR1Q9BZE9 553 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 XYLT2Q9H1B5 865 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 KCTD10Q9H3F6 313 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 PRDM12Q9H4Q4 367 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 PRSS50Q9UI38 385 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 TRHDEQ9UKU6 1024 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SPEF1Q9Y4P9 236 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 SLC4A7Q9Y6M7 1214 aa5.21□□□□□ -1.58
HMGB1P11-201ENST00000413899 NRP2O60462 931 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 CELA3BP08861 270 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 PDGFRBP09619 1106 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 MTHFD2P13995 350 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 BMP7P18075 431 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 MRE11P49959 708 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 STAT5BP51692 787 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 ITKQ08881 620 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 NFYCQ13952 458 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 TRIM25Q14258 630 aaKnown RBP5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 MAN2A1Q16706 1144 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 ZFYVE27Q5T4F4 411 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 AGBL4Q5VU57 503 aa5.2□□□□□ -1.58
HMGB1P11-201ENST00000413899 SPOCD1Q6ZMY3 1216 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms