RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 C2orf71A6NGG8 1288 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 PSAPP07602 524 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
LIMS2-210ENST00000413578 NUBP1P53384 320 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
LIMS2-210ENST00000413578 LLGL2Q6P1M3 1020 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 CKAP2LQ8IYA6 745 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 MRPL43Q8N983 215 aaKnown RBP13.78□□□□□ -0.2
LIMS2-210ENST00000413578 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 GABBR1Q9UBS5 961 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 NID2Q14112 1375 aa13.78□□□□□ -0.2
LIMS2-210ENST00000413578 A0A0U1RQF3 1178 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 DARSP14868 501 aaKnown RBP13.77□□□□□ -0.21
LIMS2-210ENST00000413578 ADD1P35611 737 aaKnown RBP13.77□□□□□ -0.21
LIMS2-210ENST00000413578 GPC3P51654 580 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 MCTP2Q6DN12 878 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 REXO1Q8N1G1 1221 aaKnown RBP13.77□□□□□ -0.21
LIMS2-210ENST00000413578 LRRC71Q8N4P6 559 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 CASP10Q92851 521 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 FAM167AQ96KS9 214 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 SNX27Q96L92 541 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 MAP7D2Q96T17 732 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 APOL5Q9BWW9 433 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 ADAM7Q9H2U9 754 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 FAM86C1Q9NVL1 165 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 AKT3Q9Y243 479 aa13.77□□□□□ -0.21
LIMS2-210ENST00000413578 WDR64B1ANS9 1081 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 C2CD4DB7Z1M9 353 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 CLASP2O75122 1294 aaKnown RBP13.76□□□□□ -0.21
LIMS2-210ENST00000413578 EOMESO95936 686 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 ZSCAN20P17040 1043 aaPredicted RBP13.76□□□□□ -0.21
LIMS2-210ENST00000413578 KRT17Q04695 432 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 ITIH3Q06033 890 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 SMC1AQ14683 1233 aaKnown RBP13.76□□□□□ -0.21
LIMS2-210ENST00000413578 TARBP2Q15633 366 aaKnown RBP13.76□□□□□ -0.21
LIMS2-210ENST00000413578 UGCGQ16739 394 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 PRR16Q569H4 304 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 BMP2KLQ5H9B9 411 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 TRMT1LQ7Z2T5 733 aaKnown RBP13.76□□□□□ -0.21
LIMS2-210ENST00000413578 TMC7Q7Z402 723 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 TRAIPQ9BWF2 469 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 IRF2BPLQ9H1B7 796 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 NR2E1Q9Y466 385 aa13.76□□□□□ -0.21
LIMS2-210ENST00000413578 GFRA3O60609 400 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 BRD1O95696 1058 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 OATP04181 439 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-210ENST00000413578 TMOD1P28289 359 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 PRKCEQ02156 737 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 TMEM173Q86WV6 379 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-210ENST00000413578 UBALD2Q8IYN6 164 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 ABI1Q8IZP0 508 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 C6orf50Q9HD87 102 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 DISC1Q9NRI5 854 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 IRAK3Q9Y616 596 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 CFAP54Q96N23 3096 aa13.75□□□□□ -0.21
LIMS2-210ENST00000413578 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 MSH4O15457 936 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 PRPF3O43395 683 aaKnown RBP13.74□□□□□ -0.21
LIMS2-210ENST00000413578 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-210ENST00000413578 STBD1O95210 358 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 FGFR4P22455 802 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 GNA11P29992 359 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
LIMS2-210ENST00000413578 DRP2Q13474 957 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 NTRK3Q16288 839 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 B3GNT9Q6UX72 402 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 CCDC12Q8WUD4 166 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-210ENST00000413578 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 KCNB2Q92953 911 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 ZNF668Q96K58 619 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-210ENST00000413578 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
LIMS2-210ENST00000413578 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
LIMS2-210ENST00000413578 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
LIMS2-210ENST00000413578 EVPLQ92817 2033 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 PTPRZ1P23471 2315 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-210ENST00000413578 CCDC196A0A1B0GTZ2 297 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 NT5C1B-RDH14C9J2C7 533 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 BCAR1P56945 870 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-210ENST00000413578 KRT32Q14532 448 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 KIAA1841Q6NSI8 718 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 FBXL16Q8N461 479 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms