RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CDHR1Q96JP9 859 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 AIFM3Q96NN9 605 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ZNF277Q9NRM2 450 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 L3MBTL1Q9Y468 752 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 CD163L1Q9NR16 1453 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 MROH7-TTC4A0A0A0MT08 1334 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 KCNK3O14649 394 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 KRT4P19013 534 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 MAP3K7CLP57077 242 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ELF3P78545 371 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 LMNB2Q03252 620 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 DMP1Q13316 513 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 DCUN1D2Q6PH85 259 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 NEK9Q8TD19 979 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ATP2A3Q93084 1043 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 GSDMAQ96QA5 445 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 DPH5Q9H2P9 285 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 AGTPBP1Q9UPW5 1226 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 PNMA6FA0A0J9YX94 578 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 PHF20L1A8MW92 1017 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 STK10O94804 968 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 S100A1P23297 94 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 RESTQ13127 1097 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ITIH4Q14624 930 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SF3B3Q15393 1217 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ANKRD20A2Q5SQ80 823 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ANKRD20A1Q5TYW2 823 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 LINC00301Q8NCQ3 95 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 RNF34Q969K3 372 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SPATA17Q96L03 361 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 NDNQ99608 321 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 METTL14Q9HCE5 456 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 NDE1Q9NXR1 346 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ARL2BPQ9Y2Y0 163 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 TECPR2O15040 1411 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 P4HA1P13674 534 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 STAT1P42224 750 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 CACNA2D1P54289 1103 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 HAUS8Q9BT25 410 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 TMEM60Q9H2L4 133 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 SSX2IPQ9Y2D8 614 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ATP8A1Q9Y2Q0 1164 aa9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ZC3H13Q5T200 1668 aaKnown RBP9.12□□□□□ -0.95
PBRM1-209ENST00000412587 ABCC12Q96J65 1359 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 HNRNPCL1O60812 293 aaKnown RBP9.11□□□□□ -0.95
PBRM1-209ENST00000412587 GSTT1P30711 240 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 MED21Q13503 144 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 SCARF1Q14162 830 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ATG9AQ7Z3C6 839 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ZNF554Q86TJ5 538 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 RNF169Q8NCN4 708 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 GJA10Q969M2 543 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ABHD8Q96I13 439 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ZIM3Q96PE6 472 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 SH3GL1Q99961 368 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 LSM14BQ9BX40 385 aaKnown RBP9.11□□□□□ -0.95
PBRM1-209ENST00000412587 FGFR1OP2Q9NVK5 253 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 HDAC6Q9UBN7 1215 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 TRAF3IP3Q9Y228 551 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 LZTS1Q9Y250 596 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 DIP2BQ9P265 1576 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 RFX7Q2KHR2 1363 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 PLEKHA8P1O95397 391 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 KRT15P19012 456 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 LMNB1P20700 586 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 YWHAEP62258 255 aaKnown RBP9.11□□□□□ -0.95
PBRM1-209ENST00000412587 AP2B1P63010 937 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 IGBP1P78318 339 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 CDR2Q01850 454 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ADAM9Q13443 819 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 RCN1Q15293 331 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ALX1Q15699 326 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 ZCWPW2Q504Y3 356 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 DAB2IPQ5VWQ8 1189 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 PRR5LQ6MZQ0 368 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 TMTC3Q6ZXV5 915 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 UBL4BQ8N7F7 174 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 PPP1R14BQ96C90 147 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 GRAMD1AQ96CP6 724 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 LRRC37BQ96QE4 947 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 XPO6Q96QU8 1125 aaKnown RBP9.11□□□□□ -0.95
PBRM1-209ENST00000412587 CRAMP1Q96RY5 1269 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 MMS19Q96T76 1030 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 TMEM47Q9BQJ4 181 aa9.11□□□□□ -0.95
PBRM1-209ENST00000412587 LRCH1Q9Y2L9 728 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms