RNA–Protein interactions for RNA: ENST00000412128.1

PTMA-206, Transcript of prothymosin alpha, human

TSL 3

Gene PTMA, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTMA-206	ENST00000412128	PLAGL2	Q9UPG8	496 aa		27.59	■■■□□ 2.01
PTMA-206	ENST00000412128	LIMCH1	Q9UPQ0	1083 aa		27.59	■■■□□ 2.01
PTMA-206	ENST00000412128	TCF20	Q9UGU0	1960 aa	Known RBP	27.59	■■■□□ 2.01
PTMA-206	ENST00000412128	DKC1	O60832	514 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	DNM2	P50570	870 aa		27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	SPIRE1	Q08AE8	756 aa		27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	EPHA7	Q15375	998 aa		27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	POTED	Q86YR6	584 aa		27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	NECAB3	Q96P71	396 aa	Predicted RBP	27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	SH2D3A	Q9BRG2	576 aa		27.58	■■■□□ 2.01
PTMA-206	ENST00000412128	MYO7A	Q13402	2215 aa		27.57	■■■□□ 2
PTMA-206	ENST00000412128	BTBD18	B2RXH4	712 aa		27.57	■■■□□ 2
PTMA-206	ENST00000412128	BAG4	O95429	457 aa	Known RBP	27.57	■■■□□ 2
PTMA-206	ENST00000412128	LEXM	Q3ZCV2	418 aa		27.57	■■■□□ 2
PTMA-206	ENST00000412128	FAM102B	Q5T8I3	360 aa		27.57	■■■□□ 2
PTMA-206	ENST00000412128	SLFN12	Q8IYM2	578 aa		27.57	■■■□□ 2
PTMA-206	ENST00000412128	ZNF668	Q96K58	619 aa	Predicted RBP	27.57	■■■□□ 2
PTMA-206	ENST00000412128	ATP6V0A4	Q9HBG4	840 aa		27.57	■■■□□ 2
PTMA-206	ENST00000412128	MARCH6	O60337	910 aa		27.56	■■■□□ 2
PTMA-206	ENST00000412128	ZSCAN20	P17040	1043 aa	Predicted RBP	27.56	■■■□□ 2
PTMA-206	ENST00000412128	CAMK1	Q14012	370 aa		27.56	■■■□□ 2
PTMA-206	ENST00000412128	DIS3L2	Q8IYB7	885 aa	Known RBP	27.56	■■■□□ 2
PTMA-206	ENST00000412128	SPPL3	Q8TCT6	385 aa		27.56	■■■□□ 2
PTMA-206	ENST00000412128	NLRP7	Q8WX94	980 aa		27.56	■■■□□ 2
PTMA-206	ENST00000412128	PABPC5	Q96DU9	382 aa	Known RBP	27.56	■■■□□ 2
PTMA-206	ENST00000412128	JPH2	Q9BR39	696 aa	Predicted RBP	27.56	■■■□□ 2
PTMA-206	ENST00000412128	ALG13	Q9NP73	1137 aa	Known RBP	27.56	■■■□□ 2
PTMA-206	ENST00000412128	CYP26B1	Q9NR63	512 aa		27.56	■■■□□ 2
PTMA-206	ENST00000412128	WRAP73	Q9P2S5	460 aa	Predicted RBP	27.56	■■■□□ 2
PTMA-206	ENST00000412128	PPME1	Q9Y570	386 aa		27.56	■■■□□ 2
PTMA-206	ENST00000412128	NCK2	O43639	380 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	ITGB1	P05556	798 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	IBSP	P21815	317 aa	Predicted RBP	27.55	■■■□□ 2
PTMA-206	ENST00000412128	KCNA5	P22460	613 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	TRIM29	Q14134	588 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	C8orf34	Q49A92	452 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	C4orf19	Q8IY42	314 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	KLHL23	Q8NBE8	558 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	NEK9	Q8TD19	979 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	KIF2C	Q99661	725 aa		27.55	■■■□□ 2
PTMA-206	ENST00000412128	GCOM2	Q9BZD3	368 aa	Predicted RBP	27.55	■■■□□ 2
PTMA-206	ENST00000412128	SUCLA2	Q9P2R7	463 aa	Predicted RBP	27.55	■■■□□ 2
PTMA-206	ENST00000412128	TBKBP1	A7MCY6	615 aa		27.54	■■■□□ 2
PTMA-206	ENST00000412128	NPEPPS	P55786	919 aa		27.54	■■■□□ 2
PTMA-206	ENST00000412128	PLA2G4F	Q68DD2	849 aa		27.54	■■■□□ 2
PTMA-206	ENST00000412128	ZNF410	Q86VK4	478 aa		27.54	■■■□□ 2
PTMA-206	ENST00000412128	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	27.54	■■■□□ 2
PTMA-206	ENST00000412128	SCLT1	Q96NL6	688 aa		27.54	■■■□□ 2
PTMA-206	ENST00000412128	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	27.53	■■■□□ 2
PTMA-206	ENST00000412128	FGFR1	P11362	822 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128	DNAJB1	P25685	340 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128	ECHDC2	Q86YB7	292 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128	EXOC8	Q8IYI6	725 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128	ZNF579	Q8NAF0	562 aa	Known RBP	27.53	■■■□□ 2
PTMA-206	ENST00000412128	LLPH	Q9BRT6	129 aa	Known RBP	27.53	■■■□□ 2
PTMA-206	ENST00000412128	LXN	Q9BS40	222 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128	DHX33	Q9H6R0	707 aa	Known RBP	27.53	■■■□□ 2
PTMA-206	ENST00000412128	TYW1	Q9NV66	732 aa	Known RBP	27.53	■■■□□ 2
PTMA-206	ENST00000412128	RGL1	Q9NZL6	768 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128	KIAA1671	Q9BY89	1806 aa		27.53	■■■□□ 2
PTMA-206	ENST00000412128		A0A087WZ62	844 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	HOXA2	O43364	376 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	FGFR4	P22455	802 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	CTC1	Q2NKJ3	1217 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	NCAPH2	Q6IBW4	605 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	CEP170P1	Q96L14	293 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	FDXACB1	Q9BRP7	624 aa	Predicted RBP	27.52	■■■□□ 2
PTMA-206	ENST00000412128	TMEM117	Q9H0C3	514 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	ZSWIM4	Q9H7M6	989 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	CHST12	Q9NRB3	414 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	AAAS	Q9NRG9	546 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128	RNF19A	Q9NV58	838 aa		27.52	■■■□□ 2
PTMA-206	ENST00000412128		A0A0U1RQF3	1178 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	CSDE1	O75534	798 aa	Known RBP	27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	SLITRK3	O94933	977 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	RHPN2	Q8IUC4	686 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	CCDC83	Q8IWF9	413 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	SLC7A3	Q8WY07	619 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	DYDC2	Q96IM9	177 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	ZSCAN31	Q96LW9	406 aa	Predicted RBP	27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	CASD1	Q96PB1	797 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	INO80B	Q9C086	356 aa	Predicted RBP	27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	CWH43	Q9H720	699 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	PCDHA12	Q9UN75	941 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	PCDHB12	Q9Y5F1	795 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	ATG2A	Q2TAZ0	1938 aa		27.51	■■□□□ 1.99
PTMA-206	ENST00000412128	WNT7A	O00755	349 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	EOMES	O95936	686 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	YWHAB	P31946	246 aa	Known RBP	27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	RFC5	P40937	340 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	FOSB	P53539	338 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	HYAL1	Q12794	435 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	CALCRL	Q16602	461 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	PUS10	Q3MIT2	529 aa	Known RBP	27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	OTUD6A	Q7L8S5	288 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	ZNF598	Q86UK7	904 aa	Known RBP	27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	POF1B	Q8WVV4	589 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	MTMR9	Q96QG7	549 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	HSD17B14	Q9BPX1	270 aa		27.5	■■□□□ 1.99
PTMA-206	ENST00000412128	TRAIP	Q9BWF2	469 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms