RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 KANSL1LA0AUZ9 987 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PLOD2O00469 737 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF213O14771 459 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ASNA1O43681 348 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 VAV1P15498 845 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CCND1P24385 295 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ETF1P62495 437 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 STX4Q12846 297 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ZBTB6Q15916 424 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 NDUFAF6Q330K2 333 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MCMDC2Q4G0Z9 681 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TTC22Q5TAA0 569 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 NUP93Q8N1F7 819 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 SLC17A8Q8NDX2 589 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MAGEC3Q8TD91 643 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 SLC9A6Q92581 669 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC28BQ9BUN5 200 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 OSBPL1AQ9BXW6 950 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RUBCNLQ9H714 662 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 KAT14Q9H8E8 782 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ARL5AQ9Y689 179 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 H3BUI4 141 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 APOL1O14791 398 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 FEN1P39748 380 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CLK1P49759 484 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 HPCAP84074 193 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 INPP5AQ14642 412 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ASIC2Q16515 512 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF618Q5T7W0 954 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 APOA5Q6Q788 366 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ACAD11Q709F0 780 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 FAM9CQ8IZT9 166 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 NEUROD4Q9HD90 331 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 DDX56Q9NY93 547 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 STOML1Q9UBI4 398 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 RNF103-CHMP3A0A140T963 221 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PTPDC1A2A3K4 754 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 B2RBV5 119 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CENPAP49450 140 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ATP1A2P50993 1020 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PTGDRQ13258 359 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TRIM25Q14258 630 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 MAPRE1Q15691 268 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 LRRC36Q1X8D7 754 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 SWI5Q1ZZU3 235 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PPP1R42Q7Z4L9 355 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 DDHD1Q8NEL9 900 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 RUBCNQ92622 972 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 GLMNQ92990 594 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ZC3H10Q96K80 434 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PI4K2AQ9BTU6 479 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 EXO5Q9H790 373 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CNOT10Q9H9A5 744 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CYTH4Q9UIA0 394 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 XPO7Q9UIA9 1087 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TNIKQ9UKE5 1360 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 UBE2QL1A1L167 161 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 STAM2O75886 525 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 HMOX1P09601 288 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ATP8B2P98198 1209 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 BNC1Q01954 994 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 RBBP4Q09028 425 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 RIPPLY1Q0D2K3 151 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 MORF4L2Q15014 288 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CKAP2Q8WWK9 683 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 MYLPFQ96A32 169 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 FAM227BQ96M60 508 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 GGNBP2Q9H3C7 697 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 EHD2Q9NZN4 543 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TRAF3IP3Q9Y228 551 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 COQ6Q9Y2Z9 468 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 C2orf71A6NGG8 1288 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 BTBD19C9JJ37 291 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CUTAO60888 179 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 SERPINA1P01009 418 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 BRAFP15056 766 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 IL12AP29459 219 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 AFMP43652 599 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CCT4P50991 539 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PAPOLAP51003 745 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ORC2Q13416 577 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 METTL24Q5JXM2 366 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CNSTQ6PJW8 725 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CHRDL2Q6WN34 429 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 RSRC2Q7L4I2 434 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 GPIHBP1Q8IV16 184 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TRPV3Q8NET8 790 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ALKBH8Q96BT7 664 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 FOPNLQ96NB1 174 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PANX2Q96RD6 677 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 OSBPL9Q96SU4 736 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 BICC1Q9H694 974 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 LATS2Q9NRM7 1088 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TBC1D14Q9P2M4 693 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 GUCA1BQ9UMX6 200 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CECR2Q9BXF3 1484 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 AIPO00170 330 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 FTLP02792 175 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms