RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NEMFO60524 1076 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 CSDE1O75534 798 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 SLITRK3O94933 977 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 DARSP14868 501 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 ATP2B1P20020 1258 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 FGFR4P22455 802 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 CTNNB1P35222 781 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 MRPS5P82675 430 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 HMGN5P82970 282 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 CTTNQ14247 550 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 SAFBQ15424 915 aaKnown RBP eCLIP19.84■□□□□ 0.77
LSM5-204ENST00000409909 PAN2Q504Q3 1202 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 C4orf19Q8IY42 314 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 CMTR2Q8IYT2 770 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 NLRP7Q8WX94 980 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 MRPL38Q96DV4 380 aaKnown RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 TMEM60Q9H2L4 133 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 TTC12Q9H892 705 aaPredicted RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 C1orf112Q9NSG2 853 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 SUCLA2Q9P2R7 463 aaPredicted RBP19.84■□□□□ 0.77
LSM5-204ENST00000409909 LRFN2Q9ULH4 789 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 PCDHB7Q9Y5E2 793 aa19.84■□□□□ 0.77
LSM5-204ENST00000409909 BDP1A6H8Y1 2624 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 DKC1O60832 514 aaKnown RBP eCLIP19.83■□□□□ 0.77
LSM5-204ENST00000409909 TXKP42681 527 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 DNM2P50570 870 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 CYP4A11Q02928 519 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 FAM102BQ5T8I3 360 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 KSR1Q8IVT5 923 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 CEP170P1Q96L14 293 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 HSD17B14Q9BPX1 270 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 FOXP1Q9H334 677 aaPredicted RBP19.83■□□□□ 0.77
LSM5-204ENST00000409909 ZSWIM4Q9H7M6 989 aa19.83■□□□□ 0.77
LSM5-204ENST00000409909 A0A087WZ62 844 aa19.82■□□□□ 0.76
LSM5-204ENST00000409909 CD2BP2O95400 341 aaKnown RBP19.82■□□□□ 0.76
LSM5-204ENST00000409909 RB1P06400 928 aa19.82■□□□□ 0.76
LSM5-204ENST00000409909 YWHABP31946 246 aaKnown RBP19.82■□□□□ 0.76
LSM5-204ENST00000409909 MCM7P33993 719 aa19.82■□□□□ 0.76
LSM5-204ENST00000409909 TPH2Q8IWU9 490 aa19.82■□□□□ 0.76
LSM5-204ENST00000409909 SCLT1Q96NL6 688 aa19.82■□□□□ 0.76
LSM5-204ENST00000409909 EIF2AK1Q9BQI3 630 aaKnown RBP19.82■□□□□ 0.76
LSM5-204ENST00000409909 FDXACB1Q9BRP7 624 aaPredicted RBP19.82■□□□□ 0.76
LSM5-204ENST00000409909 DHX33Q9H6R0 707 aaKnown RBP19.82■□□□□ 0.76
LSM5-204ENST00000409909 RWDD3Q9Y3V2 267 aa19.82■□□□□ 0.76
LSM5-204ENST00000409909 KIAA1671Q9BY89 1806 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 GRM6O15303 877 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 CDC42EP1Q00587 391 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 PTPROQ16827 1216 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 RHPN2Q8IUC4 686 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 FAM184AQ8NB25 1140 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 HLA-CQ95604 372 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 C11orf84Q9BUA3 381 aaPredicted RBP19.81■□□□□ 0.76
LSM5-204ENST00000409909 GCOM2Q9BZD3 368 aaPredicted RBP19.81■□□□□ 0.76
LSM5-204ENST00000409909 TMEM161AQ9NX61 479 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 COG5Q9UP83 839 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 FNDC1Q4ZHG4 1894 aaPredicted RBP19.81■□□□□ 0.76
LSM5-204ENST00000409909 NCOR1O75376 2440 aa19.81■□□□□ 0.76
LSM5-204ENST00000409909 ST18O60284 1047 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 KCNQ1P51787 676 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 ZNF174Q15697 407 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 OTUD6AQ7L8S5 288 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 SLC7A3Q8WY07 619 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 SYMPKQ92797 1274 aaKnown RBP19.8■□□□□ 0.76
LSM5-204ENST00000409909 TMEM143Q96AN5 459 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 JPH2Q9BR39 696 aaPredicted RBP19.8■□□□□ 0.76
LSM5-204ENST00000409909 PLVAPQ9BX97 442 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 ELAC1Q9H777 363 aaKnown RBP19.8■□□□□ 0.76
LSM5-204ENST00000409909 PPME1Q9Y570 386 aa19.8■□□□□ 0.76
LSM5-204ENST00000409909 ATG2AQ2TAZ0 1938 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 TBKBP1A7MCY6 615 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 LYPLA2O95372 231 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 FGFR1P11362 822 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 BMP1P13497 986 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 ZSCAN20P17040 1043 aaPredicted RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 RFC5P40937 340 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 POLGP54098 1239 aaPredicted RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 XKR9Q5GH70 373 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 ZNF410Q86VK4 478 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 NOSTRINQ8IVI9 506 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 PRPF31Q8WWY3 499 aaKnown RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 TMX3Q96JJ7 454 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 TBC1D32Q96NH3 1257 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 UPF2Q9HAU5 1272 aaKnown RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 ATP6V0A4Q9HBG4 840 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 IFT122Q9HBG6 1241 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 ALG13Q9NP73 1137 aaKnown RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 BMP2KQ9NSY1 1161 aaPredicted RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 RNF19AQ9NV58 838 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
LSM5-204ENST00000409909 PLAGL2Q9UPG8 496 aa19.79■□□□□ 0.76
LSM5-204ENST00000409909 TCF20Q9UGU0 1960 aaKnown RBP19.78■□□□□ 0.76
LSM5-204ENST00000409909 A0A087WWV3 80 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.78■□□□□ 0.76
LSM5-204ENST00000409909 POTEMA6NI47 508 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 CAMK1Q14012 370 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 EMC2Q15006 297 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 ECHDC2Q86YB7 292 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 EXOC8Q8IYI6 725 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 NLRP4Q96MN2 994 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 HCSTQ9UBK5 93 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms