RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.59■□□□□ 0.09
GYPC-203ENST00000409836 ATP2A2P16615 1042 aaKnown RBP15.59■□□□□ 0.09
GYPC-203ENST00000409836 EIF4BP23588 611 aaKnown RBP15.59■□□□□ 0.09
GYPC-203ENST00000409836 ARL2P36404 184 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 NLRP11P59045 1033 aaKnown RBP15.59■□□□□ 0.09
GYPC-203ENST00000409836 TMEM62Q0P6H9 643 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 MXD4Q14582 209 aaPredicted RBP15.59■□□□□ 0.09
GYPC-203ENST00000409836 FAM228AQ86W67 206 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 LINC00301Q8NCQ3 95 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 LINC01599Q8WXQ3 324 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 MTRQ99707 1265 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 CCSER1Q9C0I3 900 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 CDHR5Q9HBB8 845 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 IFT122Q9HBG6 1241 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 PADI3Q9ULW8 664 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 ZDHHC9Q9Y397 364 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 PCDHA11Q9Y5I1 949 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
GYPC-203ENST00000409836 ASAP2O43150 1006 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 PPP6R2O75170 966 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 EYA4O95677 639 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 CD52P31358 61 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 DEFB103AP81534 67 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 GRIN1Q05586 938 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 PAK2Q13177 524 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 GRB10Q13322 594 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 PCBP1Q15365 356 aaKnown RBP eCLIP15.58■□□□□ 0.08
GYPC-203ENST00000409836 RAB30Q15771 203 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 HERC6Q8IVU3 1022 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 ZNF396Q96N95 335 aaPredicted RBP15.58■□□□□ 0.08
GYPC-203ENST00000409836 PNMA5Q96PV4 448 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 OSMRQ99650 979 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 TRAIPQ9BWF2 469 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 TMX1Q9H3N1 280 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 RC3H2Q9HBD1 1191 aaKnown RBP15.58■□□□□ 0.08
GYPC-203ENST00000409836 DDX19AQ9NUU7 478 aaKnown RBP15.58■□□□□ 0.08
GYPC-203ENST00000409836 KCND2Q9NZV8 630 aa15.58■□□□□ 0.08
GYPC-203ENST00000409836 SUCLA2Q9P2R7 463 aaPredicted RBP15.58■□□□□ 0.08
GYPC-203ENST00000409836 NOC2LQ9Y3T9 749 aaKnown RBP15.58■□□□□ 0.08
GYPC-203ENST00000409836 FNDC1Q4ZHG4 1894 aaPredicted RBP15.57■□□□□ 0.08
GYPC-203ENST00000409836 NLRC5Q86WI3 1866 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 TRANK1O15050 2925 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 GPR182O15218 404 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 RPS6KA5O75582 802 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 GJB5O95377 273 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 CYP11B2P19099 503 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 DNAJB2P25686 324 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 KCNJ6P48051 423 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 HTRA4P83105 476 aaPredicted RBP15.57■□□□□ 0.08
GYPC-203ENST00000409836 DSC3Q14574 896 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 KCNK18Q7Z418 384 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
GYPC-203ENST00000409836 KCNN1Q92952 543 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 LRCH3Q96II8 777 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
GYPC-203ENST00000409836 PBX4Q9BYU1 374 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 BHMT2Q9H2M3 363 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 KIAA1024Q9UPX6 916 aa15.57■□□□□ 0.08
GYPC-203ENST00000409836 ARHGEF35A5YM69 484 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 ZBBXA8MT70 800 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 USO1O60763 962 aaKnown RBP15.56■□□□□ 0.08
GYPC-203ENST00000409836 AMHP03971 560 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 GUCY2CP25092 1073 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 CDC25AP30304 524 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 LAMTOR4Q0VGL1 99 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 CDCA2Q69YH5 1023 aaPredicted RBP15.56■□□□□ 0.08
GYPC-203ENST00000409836 PADI6Q6TGC4 694 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 SRGAP1Q7Z6B7 1085 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 CABP7Q86V35 215 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 RHPN2Q8IUC4 686 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 KRI1Q8N9T8 703 aaKnown RBP15.56■□□□□ 0.08
GYPC-203ENST00000409836 PRPF31Q8WWY3 499 aaKnown RBP15.56■□□□□ 0.08
GYPC-203ENST00000409836 TOP1MTQ969P6 601 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 TMEM143Q96AN5 459 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 TIPINQ9BVW5 301 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 GCOM2Q9BZD3 368 aaPredicted RBP15.56■□□□□ 0.08
GYPC-203ENST00000409836 C1orf112Q9NSG2 853 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 ST3GAL5Q9UNP4 418 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 DNM3Q9UQ16 869 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 COL4A4P53420 1690 aaPredicted RBP15.56■□□□□ 0.08
GYPC-203ENST00000409836 KIAA1671Q9BY89 1806 aa15.56■□□□□ 0.08
GYPC-203ENST00000409836 A0A087WZ62 844 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 SFPQP23246 707 aaKnown RBP eCLIP15.55■□□□□ 0.08
GYPC-203ENST00000409836 GLRA2P23416 452 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 UBA7P41226 1012 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 SLC12A3P55017 1021 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 PTENP60484 403 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 CAPSQ13938 189 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.55■□□□□ 0.087e-12■■■■■ 33.1
GYPC-203ENST00000409836 SYT2Q8N9I0 419 aaPredicted RBP15.55■□□□□ 0.08
GYPC-203ENST00000409836 KCNG4Q8TDN1 519 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 LRRC15Q8TF66 581 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 FDXACB1Q9BRP7 624 aaPredicted RBP15.55■□□□□ 0.08
GYPC-203ENST00000409836 INO80BQ9C086 356 aaPredicted RBP15.55■□□□□ 0.08
GYPC-203ENST00000409836 CSRNP2Q9H175 543 aa15.55■□□□□ 0.08
GYPC-203ENST00000409836 DAXXQ9UER7 740 aaPredicted RBP15.55■□□□□ 0.08
GYPC-203ENST00000409836 C9IYK1 514 aa15.54■□□□□ 0.08
GYPC-203ENST00000409836 ENPP3O14638 875 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms