RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MUTP22033 750 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 CCT6AP40227 531 aaKnown RBP34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ARL6IP4Q66PJ3 421 aaKnown RBP34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 FAM117BQ6P1L5 589 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 RHPN2Q8IUC4 686 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 NLRP7Q8WX94 980 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 MTRQ99707 1265 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ZBED2Q9BTP6 218 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 XPNPEP1Q9NQW7 623 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ST3GAL5Q9UNP4 418 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 CA3P07451 260 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 EIF4BP23588 611 aaKnown RBP34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ECM1Q16610 540 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ODR4Q5SWX8 454 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 SNX29Q8TEQ0 813 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 TOP1MTQ969P6 601 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 TMEM143Q96AN5 459 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 NACC1Q96RE7 527 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 SLC28A3Q9HAS3 691 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 DBR1Q9UK59 544 aaKnown RBP34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 STK24Q9Y6E0 443 aa34.74■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ENPP3O14638 875 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 GPR182O15218 404 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 DARSP14868 501 aaKnown RBP34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 CDC42EP1Q00587 391 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 RTN4RL1Q86UN2 441 aaPredicted RBP34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 KSR1Q8IVT5 923 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 GUCD1Q96NT3 240 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 TSPYL2Q9H2G4 693 aaPredicted RBP34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ATP6V0A4Q9HBG4 840 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 COL4A3BPQ9Y5P4 624 aa34.73■■■■□ 3.15
TRAF3IP1-203ENST00000409739 VWA3AA6NCI4 1184 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 DGAT1O75907 488 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 BMP15O95972 392 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 SF3A1Q15459 793 aaKnown RBP34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 PPP2R2DQ66LE6 453 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 FAM173BQ6P4H8 233 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ZNF410Q86VK4 478 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 TCP11Q8WWU5 503 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 PSPC1Q8WXF1 523 aaKnown RBP34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 COL4A6Q14031 1691 aa34.72■■■■□ 3.15
TRAF3IP1-203ENST00000409739 A0A087WZ62 844 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 LCHNA4D1U4 455 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 MGEA5O60502 916 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 ARHGEF15O94989 841 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 UPP2O95045 317 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 CDC25AP30304 524 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 NLRP4Q96MN2 994 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 RAD9AQ99638 391 aa34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 FDXACB1Q9BRP7 624 aaPredicted RBP34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 MMTAG2Q9BU76 263 aaKnown RBP34.71■■■■□ 3.15
TRAF3IP1-203ENST00000409739 RALGAPA2Q2PPJ7 1873 aa34.7■■■■□ 3.15
TRAF3IP1-203ENST00000409739 FNDC1Q4ZHG4 1894 aaPredicted RBP34.7■■■■□ 3.15
TRAF3IP1-203ENST00000409739 KRT79Q5XKE5 535 aa34.7■■■■□ 3.15
TRAF3IP1-203ENST00000409739 SPRYD3Q8NCJ5 442 aa34.7■■■■□ 3.15
TRAF3IP1-203ENST00000409739 PRPF31Q8WWY3 499 aaKnown RBP34.7■■■■□ 3.15
TRAF3IP1-203ENST00000409739 GCOM2Q9BZD3 368 aaPredicted RBP34.7■■■■□ 3.15
TRAF3IP1-203ENST00000409739 COL4A4P53420 1690 aaPredicted RBP34.7■■■■□ 3.14
TRAF3IP1-203ENST00000409739 USO1O60763 962 aaKnown RBP34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 HTRA4P83105 476 aaPredicted RBP34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 FAM43BQ6ZT52 329 aaPredicted RBP34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 ZSCAN16Q9H4T2 348 aaPredicted RBP34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 DDX19AQ9NUU7 478 aaKnown RBP34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 KIAA1024Q9UPX6 916 aa34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 CLIC4Q9Y696 253 aa34.69■■■■□ 3.14
TRAF3IP1-203ENST00000409739 CSDE1O75534 798 aaKnown RBP34.68■■■■□ 3.14
TRAF3IP1-203ENST00000409739 LAMTOR4Q0VGL1 99 aa34.68■■■■□ 3.14
TRAF3IP1-203ENST00000409739 GRIN2CQ14957 1233 aa34.68■■■■□ 3.14
TRAF3IP1-203ENST00000409739 KIAA1671Q9BY89 1806 aa34.68■■■■□ 3.14
TRAF3IP1-203ENST00000409739 INSL6Q9Y581 213 aa34.68■■■■□ 3.14
TRAF3IP1-203ENST00000409739 MYH11P35749 1972 aa34.67■■■■□ 3.14
TRAF3IP1-203ENST00000409739 FGFR4P22455 802 aa34.67■■■■□ 3.14
TRAF3IP1-203ENST00000409739 TAP1Q03518 808 aa34.67■■■■□ 3.14
TRAF3IP1-203ENST00000409739 ADAM2Q99965 735 aa34.67■■■■□ 3.14
TRAF3IP1-203ENST00000409739 IFT122Q9HBG6 1241 aa34.67■■■■□ 3.14
TRAF3IP1-203ENST00000409739 DSC3Q14574 896 aa34.66■■■■□ 3.14
TRAF3IP1-203ENST00000409739 PTPAQ15257 358 aa34.66■■■■□ 3.14
TRAF3IP1-203ENST00000409739 CDX2Q99626 313 aaPredicted RBP34.66■■■■□ 3.14
TRAF3IP1-203ENST00000409739 DENND3A2RUS2 1198 aa34.65■■■■□ 3.14
TRAF3IP1-203ENST00000409739 ARHGEF35A5YM69 484 aa34.65■■■■□ 3.14
TRAF3IP1-203ENST00000409739 SP7Q8TDD2 431 aaPredicted RBP34.65■■■■□ 3.14
TRAF3IP1-203ENST00000409739 YME1L1Q96TA2 773 aa34.65■■■■□ 3.14
TRAF3IP1-203ENST00000409739 RGS18Q9NS28 235 aa34.65■■■■□ 3.14
TRAF3IP1-203ENST00000409739 TRANK1O15050 2925 aa34.65■■■■□ 3.14
TRAF3IP1-203ENST00000409739 ASAP2O43150 1006 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 SRGAP2CP0DJJ0 459 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 ARL2P36404 184 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 GRIN1Q05586 938 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 MXD4Q14582 209 aaPredicted RBP34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 PADI6Q6TGC4 694 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 CRIPAKQ8N1N5 446 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 RNF149Q8NC42 400 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 ASAP3Q8TDY4 903 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 INO80BQ9C086 356 aaPredicted RBP34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 POLR3FQ9H1D9 316 aaPredicted RBP34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 BHMT2Q9H2M3 363 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 C1orf112Q9NSG2 853 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 COL6A3P12111 3177 aa34.64■■■■□ 3.14
TRAF3IP1-203ENST00000409739 PDIA4P13667 645 aaKnown RBP34.63■■■■□ 3.13
TRAF3IP1-203ENST00000409739 SFPQP23246 707 aaKnown RBP eCLIP34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms