RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 AIPL1Q9NZN9 384 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ZSWIM5Q9P217 1185 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PDIA3P30101 505 aaKnown RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 GCLMP48507 274 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TWF1Q12792 350 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 CATSPER3Q86XQ3 398 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 HASPINQ8TF76 798 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PPP1R14AQ96A00 147 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 AIFM3Q96NN9 605 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 TMEM206Q9H813 350 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 UBXN8O00124 270 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 MXI1P50539 228 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 PRAMEP78395 509 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 RBL2Q08999 1139 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ARMC6Q6NXE6 501 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 RRM2BQ7LG56 351 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ZNF589Q86UQ0 364 aaPredicted RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 MAN1C1Q9NR34 630 aa8.99□□□□□ -0.97
SCN9A-203ENST00000409672 KDM5AP29375 1690 aaKnown RBP8.99□□□□□ -0.97
SCN9A-203ENST00000409672 KIAA1468Q9P260 1216 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 PNMA8BQ9ULN7 279 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ATP10BO94823 1461 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 P4HA2O15460 535 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 CASP14P31944 242 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ATG16L1Q676U5 607 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 PKN3Q6P5Z2 889 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TRIML1Q8N9V2 468 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 GSDMAQ96QA5 445 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TESK2Q96S53 571 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 YME1L1Q96TA2 773 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 SELENONQ9NZV5 590 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MRPL42Q9Y6G3 142 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ADGRA2Q96PE1 1338 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 RGS7P49802 495 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 COPB1P53618 953 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 SGO1Q5FBB7 561 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 RINLQ6ZS11 566 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 STAG1Q8WVM7 1258 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 GCOM2Q9BZD3 368 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MLXIPLQ9NP71 852 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 HACL1Q9UJ83 578 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ANAPC7Q9UJX3 599 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 UBE4BO95155 1302 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 IQCA1LA6NCM1 817 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 HSPA6P17066 643 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ZNF746Q6NUN9 644 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TOPORSQ9NS56 1045 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 EMILIN3Q9NT22 766 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 FAF1Q9UNN5 650 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 EDC4Q6P2E9 1401 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TMCC1O94876 653 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 HSPA4LO95757 839 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 FLOT2Q14254 428 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MAP3K21Q5TCX8 1036 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MFN1Q8IWA4 741 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 CCNYL1Q8N7R7 359 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 PPP1R9AQ9ULJ8 1098 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 EIF2AK4Q9P2K8 1649 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TXNP10599 105 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 CASP1P29466 404 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 IFNA8P32881 189 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ANGEL2Q5VTE6 544 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 KRT80Q6KB66 452 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 POLR3FQ9H1D9 316 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 DHX35Q9H5Z1 703 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ATP6V0A4Q9HBG4 840 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MRPL47Q9HD33 250 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MICAL3Q7RTP6 2002 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 RALAP11233 206 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 LONP1P36776 959 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MTIF3Q9H2K0 278 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 GPATCH8Q9UKJ3 1502 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 ZFYVE9O95405 1425 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 MDH1BQ5I0G3 518 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 CCDC124Q96CT7 223 aaKnown RBP8.98□□□□□ -0.97
SCN9A-203ENST00000409672 STRIP2Q9ULQ0 834 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 L3MBTL1Q9Y468 752 aa8.98□□□□□ -0.97
SCN9A-203ENST00000409672 BLMP54132 1417 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 PRDX5P30044 214 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 ATXN3P54252 364 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 KIZQ2M2Z5 673 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 MCTP2Q6DN12 878 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 INTS4Q96HW7 963 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 DACH2Q96NX9 599 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 DHX36Q9H2U1 1008 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 ITIH6Q6UXX5 1313 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 SYCE1LA8MT33 242 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 SPAG7O75391 227 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 ZNF235Q14590 738 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 NUDCD3Q8IVD9 361 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 INTS9Q9NV88 658 aaKnown RBP8.97□□□□□ -0.97
SCN9A-203ENST00000409672 PNMA6FA0A0J9YX94 578 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 POTEMA6NI47 508 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 SCARF1Q14162 830 aa8.97□□□□□ -0.97
SCN9A-203ENST00000409672 ZBTB18Q99592 522 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms