RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 RNF180Q86T96 592 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 BCL6BQ8N143 479 aaPredicted RBP5.85□□□□□ -1.47
PMS1-203ENST00000409593 FERMT2Q96AC1 680 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 SAMD11Q96NU1 681 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 MS4A5Q9H3V2 200 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 EMC7Q9NPA0 242 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 KCMF1Q9P0J7 381 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 PUF60Q9UHX1 559 aaKnown RBP5.85□□□□□ -1.47
PMS1-203ENST00000409593 OAZ3Q9UMX2 235 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 ST20-MTHFSA0A0A6YYL1 179 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 LCHNA4D1U4 455 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 LSP1P33241 339 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 SOX5P35711 763 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 LRRC32Q14392 662 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 DDB1Q16531 1140 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 KLHDC10Q6PID8 442 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 DDX46Q7L014 1031 aaKnown RBP5.84□□□□□ -1.47
PMS1-203ENST00000409593 TAX1BP1Q86VP1 789 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 DYDC2Q96IM9 177 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 SEMA4AQ9H3S1 761 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 MTG2Q9H4K7 406 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 POLR3BQ9NW08 1133 aaPredicted RBP5.84□□□□□ -1.47
PMS1-203ENST00000409593 DNAI1Q9UI46 699 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 DENND2AQ9ULE3 1009 aa5.84□□□□□ -1.47
PMS1-203ENST00000409593 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 CR2P20023 1033 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 STAT3P40763 770 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 ANTXR2P58335 489 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 ICAM4Q14773 271 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 ATP13A4Q4VNC1 1196 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 KIAA1841Q6NSI8 718 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 UNQ6494/PRO21346Q6UXR6 183 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 TTC1Q99614 292 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 CAAP1Q9H8G2 361 aa5.83□□□□□ -1.48
PMS1-203ENST00000409593 MAFGO15525 162 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 CNGA1P29973 690 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 MAGEA10P43363 369 aaPredicted RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 MASP1P48740 699 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 NFYCQ13952 458 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 DHCR24Q15392 516 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 TCTN3Q6NUS6 607 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 ESPNLQ6ZVH7 1005 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 BMP8AQ7Z5Y6 402 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 ZNF610Q8N9Z0 462 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 USP36Q9P275 1121 aaKnown RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 VWA7Q9Y334 891 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 MATN2O00339 956 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 KDM1AO60341 852 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 H2AFYO75367 372 aaKnown RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 PCDH8O95206 1070 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 ID4P47928 161 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 SESN2P58004 480 aaPredicted RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 PHC1P78364 1004 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 TERF2Q15554 542 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 GPR158Q5T848 1215 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 BROXQ5VW32 411 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 ZNF585AQ6P3V2 769 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 KANSL1Q7Z3B3 1105 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 HDGFL2Q7Z4V5 671 aaPredicted RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 TTC9BQ8N6N2 239 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 SLC5A5Q92911 643 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 GFM2Q969S9 779 aaKnown RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 ZNF496Q96IT1 587 aaPredicted RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 OR14A2Q96R54 314 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 NOL10Q9BSC4 688 aaKnown RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 DEF6Q9H4E7 631 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 IFT22Q9H7X7 185 aa5.82□□□□□ -1.48
PMS1-203ENST00000409593 ZFR2Q9UPR6 939 aaKnown RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 RBM8AQ9Y5S9 174 aaKnown RBP5.82□□□□□ -1.48
PMS1-203ENST00000409593 ELL2O00472 640 aaPredicted RBP5.81□□□□□ -1.48
PMS1-203ENST00000409593 NEMP1O14524 444 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 OPHN1O60890 802 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 ADRB1P08588 477 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 BPIP17213 487 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 ZBTB41Q5SVQ8 909 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 CFHR4Q92496 578 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 WDR92Q96MX6 357 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 PLA2G12BQ9BX93 195 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 PITHD1Q9GZP4 211 aaPredicted RBP5.81□□□□□ -1.48
PMS1-203ENST00000409593 SYNPO2Q9UMS6 1093 aa5.81□□□□□ -1.48
PMS1-203ENST00000409593 PATE3B3GLJ2 98 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 FOXS1O43638 330 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 ADAM17P78536 824 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 HGFACQ04756 655 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 ACAP1Q15027 740 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 HIST1H2AHQ96KK5 128 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 HIST1H2AJQ99878 128 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 APOBEC2Q9Y235 224 aaKnown RBP5.8□□□□□ -1.48
PMS1-203ENST00000409593 NOC2LQ9Y3T9 749 aaKnown RBP5.8□□□□□ -1.48
PMS1-203ENST00000409593 TCAF1Q9Y4C2 921 aa5.8□□□□□ -1.48
PMS1-203ENST00000409593 CTDP1Q9Y5B0 961 aaPredicted RBP5.8□□□□□ -1.48
PMS1-203ENST00000409593 ZNF623O75123 536 aa5.79□□□□□ -1.48
PMS1-203ENST00000409593 HNRNPLP14866 589 aaKnown RBP eCLIP5.79□□□□□ -1.483e-6■■■□□ 15.5
PMS1-203ENST00000409593 ATP2C1P98194 919 aaPredicted RBP5.79□□□□□ -1.48
PMS1-203ENST00000409593 EGFLAMQ63HQ2 1017 aa5.79□□□□□ -1.48
PMS1-203ENST00000409593 FRMD7Q6ZUT3 714 aa5.79□□□□□ -1.48
PMS1-203ENST00000409593 CXorf67Q86X51 503 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms