RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 BECN1Q14457 450 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 IGSF22Q8N9C0 903 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 CDK5RAP3Q96JB5 506 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 NACC1Q96RE7 527 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 JPH2Q9BR39 696 aaPredicted RBP21.28■■□□□ 1
PPM1B-207ENST00000409486 FDXACB1Q9BRP7 624 aaPredicted RBP21.28■■□□□ 1
PPM1B-207ENST00000409486 ADAMTS10Q9H324 1103 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 CERS4Q9HA82 394 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 ATP6V0A4Q9HBG4 840 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 POLD4Q9HCU8 107 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 ANKEF1Q9NU02 776 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 ST3GAL5Q9UNP4 418 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 SSBP05455 408 aaKnown RBP eCLIP21.27■■□□□ 1
PPM1B-207ENST00000409486 SPECC1Q5M775 1068 aa21.27■■□□□ 1
PPM1B-207ENST00000409486 FAM228AQ86W67 206 aa21.27■■□□□ 1
PPM1B-207ENST00000409486 PRPF31Q8WWY3 499 aaKnown RBP21.27■■□□□ 1
PPM1B-207ENST00000409486 PSPC1Q8WXF1 523 aaKnown RBP21.27■■□□□ 1
PPM1B-207ENST00000409486 DHX33Q9H6R0 707 aaKnown RBP21.27■■□□□ 1
PPM1B-207ENST00000409486 GPRC5CQ9NQ84 441 aa21.27■■□□□ 1
PPM1B-207ENST00000409486 TFIP11Q9UBB9 837 aaKnown RBP21.27■■□□□ 1
PPM1B-207ENST00000409486 COL4A3BPQ9Y5P4 624 aa21.27■■□□□ 1
PPM1B-207ENST00000409486 IGKV6-21A0A0C4DH24 114 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.26■□□□□ 0.99
PPM1B-207ENST00000409486 DENND3A2RUS2 1198 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 E9PMD0 336 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 EFCAB14O75071 495 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 LYPLA2O95372 231 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 CA3P07451 260 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 PDIA5Q14554 519 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 RAB30Q15771 203 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 FAM102BQ5T8I3 360 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 PPP2R2DQ66LE6 453 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 USP28Q96RU2 1077 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 POLR3FQ9H1D9 316 aaPredicted RBP21.26■□□□□ 0.99
PPM1B-207ENST00000409486 BHMT2Q9H2M3 363 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 ZSCAN16Q9H4T2 348 aaPredicted RBP21.26■□□□□ 0.99
PPM1B-207ENST00000409486 KDM3AQ9Y4C1 1321 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 ZSCAN22P10073 491 aaPredicted RBP21.26■□□□□ 0.99
PPM1B-207ENST00000409486 LINC01599Q8WXQ3 324 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 GCOM2Q9BZD3 368 aaPredicted RBP21.26■□□□□ 0.99
PPM1B-207ENST00000409486 TMX1Q9H3N1 280 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 SLC28A3Q9HAS3 691 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 ERVK-5Q9HDB9 667 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 XPNPEP1Q9NQW7 623 aa21.26■□□□□ 0.99
PPM1B-207ENST00000409486 LCHNA4D1U4 455 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 GPR182O15218 404 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 MGEA5O60502 916 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 BMP15O95972 392 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 F13A1P00488 732 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 LAMTOR4Q0VGL1 99 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 PADI6Q6TGC4 694 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 CABP7Q86V35 215 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 USP38Q8NB14 1042 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 TCP11Q8WWU5 503 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 MMTAG2Q9BU76 263 aaKnown RBP21.25■□□□□ 0.99
PPM1B-207ENST00000409486 TTYH1Q9H313 450 aaPredicted RBP21.25■□□□□ 0.99
PPM1B-207ENST00000409486 MTUS1Q9ULD2 1270 aa21.25■□□□□ 0.99
PPM1B-207ENST00000409486 ENPP3O14638 875 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 DGAT1O75907 488 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 DARSP14868 501 aaKnown RBP21.24■□□□□ 0.99
PPM1B-207ENST00000409486 EIF4BP23588 611 aaKnown RBP21.24■□□□□ 0.99
PPM1B-207ENST00000409486 DHX8Q14562 1220 aaKnown RBP21.24■□□□□ 0.99
PPM1B-207ENST00000409486 STK38Q15208 465 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 ARL6IP4Q66PJ3 421 aaKnown RBP21.24■□□□□ 0.99
PPM1B-207ENST00000409486 EXOC8Q8IYI6 725 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 RNF149Q8NC42 400 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 RNF169Q8NCN4 708 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 PHOSPHO2Q8TCD6 241 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 ASAP3Q8TDY4 903 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 CLIC6Q96NY7 704 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 YME1L1Q96TA2 773 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 ADAM2Q99965 735 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 PCDHA11Q9Y5I1 949 aa21.24■□□□□ 0.99
PPM1B-207ENST00000409486 SZT2Q5T011 3432 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 ARHGEF15O94989 841 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 LIG1P18858 919 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 UBA7P41226 1012 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 RAD51AP2Q09MP3 1159 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 TPRNQ4KMQ1 711 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 KCNK18Q7Z418 384 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 RTN4RL1Q86UN2 441 aaPredicted RBP21.23■□□□□ 0.99
PPM1B-207ENST00000409486 CSRNP2Q9H175 543 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 ZNF576Q9H609 170 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 DBR1Q9UK59 544 aaKnown RBP21.23■□□□□ 0.99
PPM1B-207ENST00000409486 LRFN2Q9ULH4 789 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 DNM3Q9UQ16 869 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 PPME1Q9Y570 386 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 STK24Q9Y6E0 443 aa21.23■□□□□ 0.99
PPM1B-207ENST00000409486 GJB5O95377 273 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 PTPAQ15257 358 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 CATSPER4Q7RTX7 472 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 SPRED2Q7Z698 418 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 ZNF396Q96N95 335 aaPredicted RBP21.22■□□□□ 0.99
PPM1B-207ENST00000409486 PNMA5Q96PV4 448 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 SEMA6BQ9H3T3 888 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 SQORQ9Y6N5 450 aa21.22■□□□□ 0.99
PPM1B-207ENST00000409486 LRRIQ4A6NIV6 560 aa21.21■□□□□ 0.99
PPM1B-207ENST00000409486 NCLP19338 710 aaKnown RBP21.21■□□□□ 0.99
PPM1B-207ENST00000409486 GRB10Q13322 594 aa21.21■□□□□ 0.99
PPM1B-207ENST00000409486 KARSQ15046 597 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms