RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DNM3Q9UQ16 869 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 ZDHHC9Q9Y397 364 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 NOC2LQ9Y3T9 749 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 ARHGEF35A5YM69 484 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 RPS6KA5O75582 802 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 EIF4BP23588 611 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 UBA7P41226 1012 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 ODR4Q5SWX8 454 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 ZNF410Q86VK4 478 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 LINC00301Q8NCQ3 95 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 PRPF31Q8WWY3 499 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 NT5C3AQ9H0P0 336 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 BHMT2Q9H2M3 363 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 TFIP11Q9UBB9 837 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 COL4A3BPQ9Y5P4 624 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 SIP14410 1827 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 GPR182O15218 404 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 USO1O60763 962 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 DARSP14868 501 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 STK38Q15208 465 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 ZRSR1Q15695 479 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 PADI6Q6TGC4 694 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 CABP7Q86V35 215 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 MCPH1Q8NEM0 835 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 LRCH3Q96II8 777 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 CDK5RAP3Q96JB5 506 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 ZNF668Q96K58 619 aaPredicted RBP22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 FTHL17Q9BXU8 183 aa22.08■■□□□ 1.12
PDLIM2-207ENST00000409417 SZT2Q5T011 3432 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 GRXCR1A8MXD5 290 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 ASAP2O43150 1006 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 EYA4O95677 639 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 LAMTOR4Q0VGL1 99 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 GRB10Q13322 594 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 MXD4Q14582 209 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 FOXD4L6Q3SYB3 417 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 FOXD4L3Q6VB84 417 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 KSR1Q8IVT5 923 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 KRI1Q8N9T8 703 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 PNMA5Q96PV4 448 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 GCOM2Q9BZD3 368 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 CSRNP2Q9H175 543 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 ERVK-5Q9HDB9 667 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 ST3GAL5Q9UNP4 418 aa22.07■■□□□ 1.12
PDLIM2-207ENST00000409417 E9PMD0 336 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 YEATS4O95619 227 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 CYP11B2P19099 503 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 ARL2P36404 184 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 NFX1Q12986 1120 aaKnown RBP22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 TMEM119Q4V9L6 283 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 GPR153Q6NV75 609 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 FAM228AQ86W67 206 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 HERC6Q8IVU3 1022 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 NLRP4Q96MN2 994 aa22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 DAXXQ9UER7 740 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-207ENST00000409417 A0A087WZ62 844 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 SPTLC2O15270 562 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 AMHP03971 560 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 DEFB103AP81534 67 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 KCNK18Q7Z418 384 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 CALML4Q96GE6 196 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 CLIC6Q96NY7 704 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 FDXACB1Q9BRP7 624 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 INO80BQ9C086 356 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 CCSER1Q9C0I3 900 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 TMX1Q9H3N1 280 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 IFT122Q9HBG6 1241 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 CFAP45Q9UL16 551 aa22.05■■□□□ 1.12
PDLIM2-207ENST00000409417 ENPP3O14638 875 aa22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 SRGAP2CP0DJJ0 459 aa22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 ARID2Q68CP9 1835 aa22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 EPSTI1Q96J88 318 aa22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 PLIN2Q99541 437 aa22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 PBX4Q9BYU1 374 aa22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 POLR3FQ9H1D9 316 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 TSPYL2Q9H2G4 693 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-207ENST00000409417 PPP6R2O75170 966 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 DNM1Q05193 864 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 RAB30Q15771 203 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 SPECC1Q5M775 1068 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 MAEAQ7L5Y9 396 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 MYOCDQ8IZQ8 938 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 RNF149Q8NC42 400 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 ASAP3Q8TDY4 903 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 GPRC5CQ9NQ84 441 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 MSRAQ9UJ68 235 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 PCDHA11Q9Y5I1 949 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 ATP6V1DQ9Y5K8 247 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 LOXHD1Q8IVV2 1947 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 CSDE1O75534 798 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 SFPQP23246 707 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 DNAJB2P25686 324 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 DDIT3P35638 169 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 PBX2P40425 430 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 RABGGTBP53611 331 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 POU5F1BQ06416 359 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 TFDP1Q14186 410 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 FAM102BQ5T8I3 360 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms