RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 KIF11P52732 1056 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 ADAM9Q13443 819 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 PRKG1Q13976 671 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 PPP2R5EQ16537 467 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 TSNAXIP1Q2TAA8 658 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 MEI1Q5TIA1 1274 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 OR52E8Q6IFG1 317 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 BTNL9Q6UXG8 535 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 LCA5Q86VQ0 697 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 FBF1Q8TES7 1133 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 MAIP1Q8WWC4 291 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 SYMPKQ92797 1274 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 KIFAP3Q92845 792 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 MAGOHBQ96A72 148 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 TRIM7Q9C029 511 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 STMN4Q9H169 189 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 VCX3BQ9H321 246 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 ECT2Q9H8V3 914 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 VCX3AQ9NNX9 186 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 FAM114A2Q9NRY5 505 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 ATP8A2Q9NTI2 1148 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 AGPAT5Q9NUQ2 364 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 AGAP1Q9UPQ3 857 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 CENPFP49454 3210 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 MYH10P35580 1976 aa11.53□□□□□ -0.56
NIF3L1-204ENST00000409357 BICDL2A1A5D9 508 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 CCDC169A6NNP5 214 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 F8VZ95 297 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 UBE2Q2LH0YL09 131 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 PSMA7O14818 248 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 RAD51CO43502 376 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 SUN1O94901 812 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 RPN1P04843 607 aaKnown RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 CHGBP05060 677 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 ABCD1P33897 745 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 PRCPP42785 496 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 ECE1P42892 770 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 CRKP46108 304 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TRAPPC10P48553 1259 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 PEX5P50542 639 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 CACNB3P54284 484 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 ERVK-9P63128 1117 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TNFAIP8L3Q5GJ75 292 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 WASHC2DQ5SRD0 308 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 RGMBQ6NW40 437 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TTI2Q6NXR4 508 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TMTC2Q8N394 836 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 AZIN2Q96A70 460 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 FAM136AQ96C01 138 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TUBGCP2Q9BSJ2 902 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TIPINQ9BVW5 301 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 RXFP1Q9HBX9 757 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 INCENPQ9NQS7 918 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 ARHGAP20Q9P2F6 1191 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 SERPINA10Q9UK55 444 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 TFR2Q9UP52 801 aa11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.56
NIF3L1-204ENST00000409357 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 UBOX5O94941 541 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 AGTP01019 485 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 PRDX5P30044 214 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 KCNJ2P63252 427 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 TMED1Q13445 227 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 ACVR2BQ13705 512 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 NAB2Q15742 525 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 STK32AQ8WU08 396 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 OPTNQ96CV9 577 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 KRT12Q99456 494 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 LY9Q9HBG7 655 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 PDP2Q9P2J9 529 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 HTTP42858 3142 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.57
NIF3L1-204ENST00000409357 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 RHOBTB3O94955 611 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 MMEP08473 750 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 XBP1P17861 261 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 RANBP1P43487 201 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 LBX1P52954 281 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 CYP27A1Q02318 531 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 DEUP1Q05D60 604 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 RASGRF1Q13972 1273 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 FKBP15Q5T1M5 1219 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 C10orf76Q5T2E6 689 aa11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 ARL6IP4Q66PJ3 421 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-204ENST00000409357 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms