RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 POLR3FQ9H1D9 316 aaPredicted RBP5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 KCNF1Q9H3M0 494 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 ST7Q9NRC1 585 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 HACL1Q9UJ83 578 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 NID2Q14112 1375 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 ROBO3Q96MS0 1386 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 KDM3BQ7LBC6 1761 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 GOLGA8IPA6NC78 632 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 GOLGA8JA6NMD2 632 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 UBE2Q2LH0YL09 131 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 MSH4O15457 936 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 SLC37A4O43826 429 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 CYP11B2P19099 503 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 SOX5P35711 763 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 SARNPP82979 210 aaKnown RBP5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 GUCY2DQ02846 1103 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 FAM47CQ5HY64 1035 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 E4F1Q66K89 784 aaPredicted RBP5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 DNAJC24Q6P3W2 148 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 EMBQ6PCB8 327 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 CCDC121Q6ZUS5 278 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 ANKRD13AQ8IZ07 590 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 ACER1Q8TDN7 264 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 RSAD2Q8WXG1 361 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 RNF34Q969K3 372 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 RPS6KC1Q96S38 1066 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 KRT12Q99456 494 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 STK33Q9BYT3 514 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 KCNK9Q9NPC2 374 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 KCNQ5Q9NR82 932 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 RSPH14Q9UHP6 348 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 PPP1R9AQ9ULJ8 1098 aa5.12□□□□□ -1.59
PCDH11X-207ENST00000406881 PHLPP1O60346 1717 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ASAP2O43150 1006 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 GAS2O43903 313 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 HEXIM1O94992 359 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 VIL1P09327 827 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 MYBL1P10243 752 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ATF2P15336 505 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CTNNA1P35221 906 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 PHBP35232 272 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 GCLMP48507 274 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 STAT5BP51692 787 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 OAZ1P54368 228 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 BFSP1Q12934 665 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 SNAPC2Q13487 334 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CUL1Q13616 776 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 KRT81Q14533 505 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 DRAP1Q14919 205 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 TAF12Q16514 161 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ZNF667Q5HYK9 610 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CDKAL1Q5VV42 579 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ALS2CLQ60I27 953 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CENPPQ6IPU0 288 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 EEPD1Q7L9B9 569 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CATSPER3Q86XQ3 398 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CCDC117Q8IWD4 279 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 OTUD6BQ8N6M0 293 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 TMEM35BQ8NCS4 154 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 NLRP7Q8WX94 980 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 PARD6BQ9BYG5 372 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 DDX4Q9NQI0 724 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 MAGEB2O15479 319 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 TBC1D12O60347 775 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 FTCDO95954 541 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 SRGAP2CP0DJJ0 459 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 NMT1P30419 496 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ADCY8P40145 1251 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 BACE1P56817 501 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 RWDD2BP57060 319 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 MXD4Q14582 209 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 C6orf163Q5TEZ5 329 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 TTI2Q6NXR4 508 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 SH3RF1Q7Z6J0 888 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 FBXL13Q8NEE6 735 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ATG4CQ96DT6 458 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 PAIP2Q9BPZ3 127 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 TOPORSQ9NS56 1045 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 PHRF1Q9P1Y6 1649 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 SYNGAP1Q96PV0 1343 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 AK9Q5TCS8 1911 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 SMIM23A6NLE4 172 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 NDUFAB1O14561 156 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 RGS16O15492 202 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ECM2O94769 699 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 STAMBPO95630 424 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CALB1P05937 261 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CYP3A4P08684 503 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 FXR1P51114 621 aaKnown RBP eCLIP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 CDK17Q00537 523 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 NCAPHQ15003 741 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 SLC18A3Q16572 532 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 RINT1Q6NUQ1 792 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 PPP1R21Q6ZMI0 780 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 DEFB132Q7Z7B7 95 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ZNF354CQ86Y25 554 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 GPATCH11Q8N954 259 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 ZFP91Q96JP5 570 aaPredicted RBP5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 AGBL1Q96MI9 1066 aa5.11□□□□□ -1.59
PCDH11X-207ENST00000406881 NLRP4Q96MN2 994 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms