RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SKIDA1Q1XH10 827 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 UAP1L1Q3KQV9 507 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 ATAT1Q5SQI0 421 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZBTB41Q5SVQ8 909 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 VASNQ6EMK4 673 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZC3H14Q6PJT7 736 aaKnown RBP6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 KANSL1Q7Z3B3 1105 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 AMIGO3Q86WK7 504 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 SIRT2Q8IXJ6 389 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 SHISA4Q96DD7 197 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 ACE2Q9BYF1 805 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 SLC12A5Q9H2X9 1139 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 KCTD10Q9H3F6 313 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 SEMA4AQ9H3S1 761 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 IFT122Q9HBG6 1241 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 INCENPQ9NQS7 918 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 C19orf73Q9NVV2 129 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 CTNND2Q9UQB3 1225 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 NUDT19A8MXV4 375 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 PFKMP08237 780 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 POU2F2P09086 479 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 XPAP23025 273 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 ERVFC1P60507 584 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 MAP3K12Q12852 859 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 MYBPC3Q14896 1274 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 TIGD5Q53EQ6 642 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 FAM180AQ6UWF9 173 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 B3GNT9Q6UX72 402 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 FAM43AQ8N2R8 423 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 CDYL2Q8N8U2 506 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 FATE1Q969F0 183 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 HPS3Q969F9 1004 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 TIFAQ96CG3 184 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 C1GALT1C1Q96EU7 318 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 RXFP1Q9HBX9 757 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 PCDH18Q9HCL0 1135 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 DPP7Q9UHL4 492 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 DENND2AQ9ULE3 1009 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 SYNPO2Q9UMS6 1093 aa6.01□□□□□ -1.45
HMGB3P18-201ENST00000406327 MYPNQ86TC9 1320 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 OR14I1A6ND48 311 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 FAM227AF5H4B4 570 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 WNT11O96014 354 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 RPLP2P05387 115 aaKnown RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 LPLP06858 475 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 APEX1P27695 318 aaKnown RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 TRHRP34981 398 aaPredicted RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 IL12RB1P42701 662 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 LGALS4P56470 323 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 NRG3P56975 720 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 PRR5P85299 388 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 NFATC3Q12968 1075 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 PLEKHN1Q494U1 663 aaPredicted RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 COBLL1Q53SF7 1204 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 ADGRF1Q5T601 910 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 LILRA6Q6PI73 481 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 TEPPQ6URK8 271 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 RPTNQ6XPR3 784 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 USP45Q70EL2 814 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 CHST15Q7LFX5 561 aaPredicted RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 CAMKK1Q8N5S9 505 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 IGDCC4Q8TDY8 1250 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 DIS3LQ8TF46 1054 aaKnown RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 ALG3Q92685 438 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 MVB12AQ96EY5 273 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 RNF32Q9H0A6 362 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 DDX21Q9NR30 783 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 MBNL3Q9NUK0 354 aaKnown RBP6□□□□□ -1.45
HMGB3P18-201ENST00000406327 UCKL1Q9NWZ5 548 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 GALNT8Q9NY28 637 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 PCDHB6Q9Y5E3 794 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 CDY2AQ9Y6F7 541 aa6□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZNF839A8K0R7 811 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 H3BML4 177 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 HRKO00198 91 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 MAFO75444 373 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 EFEMP2O95967 443 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 ZBED1O96006 694 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 LDHAP00338 332 aaKnown RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 HRGP04196 525 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 RNASE1P07998 156 aaKnown RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 ECE1P42892 770 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 PPARAQ07869 468 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 MALLQ13021 153 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 DPP8Q6V1X1 898 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 DENND1CQ8IV53 801 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 GRAMD1CQ8IYS0 662 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 FLAD1Q8NFF5 587 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 COA7Q96BR5 231 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 INTS4Q96HW7 963 aaKnown RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 HIST1H2AHQ96KK5 128 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 WRNIP1Q96S55 665 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 TMEM209Q96SK2 561 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 HIST1H2AJQ99878 128 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 BTBD2Q9BX70 525 aa5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 GTPBP4Q9BZE4 634 aaKnown RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 PITHD1Q9GZP4 211 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P18-201ENST00000406327 MTG2Q9H4K7 406 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms