RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 IGSF22Q8N9C0 903 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 ATP8B4Q8TF62 1192 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
RPAIN-204ENST00000405578 CDK5RAP3Q96JB5 506 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 SPATA32Q96LK8 384 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 CCDC43Q96MW1 224 aaKnown RBP11.79□□□□□ -0.52
RPAIN-204ENST00000405578 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
RPAIN-204ENST00000405578 LXNQ9BS40 222 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 MAFBQ9Y5Q3 323 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-204ENST00000405578 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 HAS3O00219 553 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 EML1O00423 815 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 SLC26A4O43511 780 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 HBP1O60381 514 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 OATP04181 439 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 MUTP22033 750 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
RPAIN-204ENST00000405578 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 PPFIA1Q13136 1202 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 PTGISQ16647 500 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 IER5LQ5T953 404 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 KCTD17Q8N5Z5 321 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-204ENST00000405578 KAT2BQ92831 832 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 PABPC5Q96DU9 382 aaKnown RBP11.78□□□□□ -0.52
RPAIN-204ENST00000405578 CALML4Q96GE6 196 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 HSD17B14Q9BPX1 270 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-204ENST00000405578 TUFT1Q9NNX1 390 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 NRCAMQ92823 1304 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 MYH7BA7E2Y1 1941 aa11.78□□□□□ -0.52
RPAIN-204ENST00000405578 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.52
RPAIN-204ENST00000405578 CACNA1HO95180 2353 aa11.77□□□□□ -0.52
RPAIN-204ENST00000405578 ABHD14A-ACY1A0A1B0GW23 586 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 GFRA3O60609 400 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 CUTAO60888 179 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 NBNO60934 754 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 SLITRK3O94933 977 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 SMIM10L2AP0DMW4 78 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 SMIM10L2BP0DMW5 78 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 SELPP16109 830 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 RPA1P27694 616 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 PRKCEQ02156 737 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 PLCB4Q15147 1175 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 PTPROQ16827 1216 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 HERC4Q5GLZ8 1057 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-204ENST00000405578 TCEAL5Q5H9L2 206 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 ZNF484Q5JVG2 852 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 C4orf19Q8IY42 314 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 EXOC8Q8IYI6 725 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 DHX38Q92620 1227 aaKnown RBP11.77□□□□□ -0.53
RPAIN-204ENST00000405578 NACC1Q96RE7 527 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 CTAGE1Q96RT6 745 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 PCYT2Q99447 389 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 NT5C3AQ9H0P0 336 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 CLDND1Q9NY35 253 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 RGL1Q9NZL6 768 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 FBXO2Q9UK22 296 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-204ENST00000405578 PPME1Q9Y570 386 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.53
RPAIN-204ENST00000405578 GOLGA6L4A6NEF3 574 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 LYPLA2O95372 231 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 CXCL10P02778 98 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 RPLP2P05387 115 aaKnown RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 INSRRP14616 1297 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 FOXK2Q01167 660 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 TCF15Q12870 199 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 CTTNQ14247 550 aaKnown RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 ZRSR1Q15695 479 aaKnown RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 CLUL1Q15846 466 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 GRIK4Q16099 956 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 IL17AQ16552 155 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 GDF6Q6KF10 455 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 TRMT1LQ7Z2T5 733 aaKnown RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 CABP7Q86V35 215 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 LEO1Q8WVC0 666 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 CSRNP2Q9H175 543 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
RPAIN-204ENST00000405578 GTF2IRD1Q9UHL9 959 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms