RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 BMP2KQ9NSY1 1161 aaPredicted RBP29.43■■■□□ 2.3
HDAC11-206ENST00000405025 SUCLA2Q9P2R7 463 aaPredicted RBP29.43■■■□□ 2.3
HDAC11-206ENST00000405025 DENND3A2RUS2 1198 aa29.42■■■□□ 2.3
HDAC11-206ENST00000405025 CSDE1O75534 798 aaKnown RBP29.42■■■□□ 2.3
HDAC11-206ENST00000405025 SARSP49591 514 aaKnown RBP29.42■■■□□ 2.3
HDAC11-206ENST00000405025 TTC38Q5R3I4 469 aa29.42■■■□□ 2.3
HDAC11-206ENST00000405025 ODR4Q5SWX8 454 aa29.42■■■□□ 2.3
HDAC11-206ENST00000405025 TMEM192Q8IY95 271 aa29.42■■■□□ 2.3
HDAC11-206ENST00000405025 BACH2Q9BYV9 841 aa29.42■■■□□ 2.3
HDAC11-206ENST00000405025 KIAA1671Q9BY89 1806 aa29.42■■■□□ 2.3
HDAC11-206ENST00000405025 C9IYK1 514 aa29.41■■■□□ 2.3
HDAC11-206ENST00000405025 U2AF2P26368 475 aaKnown RBP eCLIP29.41■■■□□ 2.3
HDAC11-206ENST00000405025 KSR1Q8IVT5 923 aa29.41■■■□□ 2.3
HDAC11-206ENST00000405025 ZNF710Q8N1W2 664 aa29.41■■■□□ 2.3
HDAC11-206ENST00000405025 IL27Q8NEV9 243 aa29.41■■■□□ 2.3
HDAC11-206ENST00000405025 DHX33Q9H6R0 707 aaKnown RBP29.41■■■□□ 2.3
HDAC11-206ENST00000405025 A0A087WZ62 844 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 STAG3L1P0CL83 205 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 GJB2P29033 226 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 MCM2P49736 904 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 DNM2P50570 870 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 BTG3Q14201 252 aaPredicted RBP29.4■■■□□ 2.3
HDAC11-206ENST00000405025 PAN2Q504Q3 1202 aaKnown RBP29.4■■■□□ 2.3
HDAC11-206ENST00000405025 XKR9Q5GH70 373 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 RHPN2Q8IUC4 686 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 SAMD11Q96NU1 681 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 FDXACB1Q9BRP7 624 aaPredicted RBP29.4■■■□□ 2.3
HDAC11-206ENST00000405025 C1orf112Q9NSG2 853 aa29.4■■■□□ 2.3
HDAC11-206ENST00000405025 OR52Z1P0C646 297 aa29.39■■■□□ 2.3
HDAC11-206ENST00000405025 TOB1P50616 345 aaPredicted RBP29.39■■■□□ 2.3
HDAC11-206ENST00000405025 POLGP54098 1239 aaPredicted RBP29.39■■■□□ 2.3
HDAC11-206ENST00000405025 SLC24A5Q71RS6 500 aa29.39■■■□□ 2.3
HDAC11-206ENST00000405025 SLC7A3Q8WY07 619 aa29.39■■■□□ 2.3
HDAC11-206ENST00000405025 TMEM143Q96AN5 459 aa29.39■■■□□ 2.3
HDAC11-206ENST00000405025 LRFN2Q9ULH4 789 aa29.39■■■□□ 2.3
HDAC11-206ENST00000405025 MRPL42Q9Y6G3 142 aaKnown RBP29.39■■■□□ 2.3
HDAC11-206ENST00000405025 A0A087WWV3 80 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 LYPLA2O95372 231 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 CTNNB1P35222 781 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 RFC5P40937 340 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 ORC2Q13416 577 aaPredicted RBP29.38■■■□□ 2.29
HDAC11-206ENST00000405025 EMC2Q15006 297 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 OTUD6AQ7L8S5 288 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 CMTR2Q8IYT2 770 aaKnown RBP29.38■■■□□ 2.29
HDAC11-206ENST00000405025 NEK9Q8TD19 979 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 NLRP4Q96MN2 994 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 JPH2Q9BR39 696 aaPredicted RBP29.38■■■□□ 2.29
HDAC11-206ENST00000405025 NOL7Q9UMY1 257 aaKnown RBP29.38■■■□□ 2.29
HDAC11-206ENST00000405025 PPME1Q9Y570 386 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 A0A0C4DFX4 3053 aa29.38■■■□□ 2.29
HDAC11-206ENST00000405025 FNDC1Q4ZHG4 1894 aaPredicted RBP29.38■■■□□ 2.29
HDAC11-206ENST00000405025 TECP42680 631 aa29.37■■■□□ 2.29
HDAC11-206ENST00000405025 TRAPPC10P48553 1259 aa29.37■■■□□ 2.29
HDAC11-206ENST00000405025 C4orf32Q8N8J7 132 aa29.37■■■□□ 2.29
HDAC11-206ENST00000405025 CLP1Q92989 425 aaKnown RBP29.37■■■□□ 2.29
HDAC11-206ENST00000405025 GCOM2Q9BZD3 368 aaPredicted RBP29.37■■■□□ 2.29
HDAC11-206ENST00000405025 PCDHB7Q9Y5E2 793 aa29.37■■■□□ 2.29
HDAC11-206ENST00000405025 H3BNC9 293 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 SPATA31C1P0DKV0 1188 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 FAM189BP81408 668 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 GPM6BQ13491 265 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 FAM102BQ5T8I3 360 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 FAM43BQ6ZT52 329 aaPredicted RBP29.36■■■□□ 2.29
HDAC11-206ENST00000405025 ZNF410Q86VK4 478 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 XPNPEP1Q9NQW7 623 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 LMCD1Q9NZU5 365 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 KIF3AQ9Y496 699 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 PCDHB6Q9Y5E3 794 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 COL4A3BPQ9Y5P4 624 aa29.36■■■□□ 2.29
HDAC11-206ENST00000405025 ATG2AQ2TAZ0 1938 aa29.35■■■□□ 2.29
HDAC11-206ENST00000405025 MED24O75448 989 aa29.35■■■□□ 2.29
HDAC11-206ENST00000405025 BMPR1AP36894 532 aa29.35■■■□□ 2.29
HDAC11-206ENST00000405025 PIGOQ8TEQ8 1089 aa29.35■■■□□ 2.29
HDAC11-206ENST00000405025 PRPF31Q8WWY3 499 aaKnown RBP29.35■■■□□ 2.29
HDAC11-206ENST00000405025 THEGQ9P2T0 379 aa29.35■■■□□ 2.29
HDAC11-206ENST00000405025 C5orf67F2Z3F1 127 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 FGFR1P11362 822 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 CDC42EP1Q00587 391 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 SKIV2LQ15477 1246 aaKnown RBP29.34■■■□□ 2.29
HDAC11-206ENST00000405025 MCTP1Q6DN14 999 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 PSPC1Q8WXF1 523 aaKnown RBP29.34■■■□□ 2.29
HDAC11-206ENST00000405025 IFT122Q9HBG6 1241 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 ANKEF1Q9NU02 776 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 TMEM161AQ9NX61 479 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 SMC3Q9UQE7 1217 aa29.34■■■□□ 2.29
HDAC11-206ENST00000405025 LAMTOR4Q0VGL1 99 aa29.33■■■□□ 2.29
HDAC11-206ENST00000405025 CATSPER3Q86XQ3 398 aa29.33■■■□□ 2.29
HDAC11-206ENST00000405025 MTRQ99707 1265 aa29.33■■■□□ 2.29
HDAC11-206ENST00000405025 RNF19AQ9NV58 838 aa29.33■■■□□ 2.29
HDAC11-206ENST00000405025 HCSTQ9UBK5 93 aa29.33■■■□□ 2.29
HDAC11-206ENST00000405025 GTF3C3Q9Y5Q9 886 aa29.33■■■□□ 2.29
HDAC11-206ENST00000405025 TBKBP1A7MCY6 615 aa29.32■■■□□ 2.28
HDAC11-206ENST00000405025 ZSCAN20P17040 1043 aaPredicted RBP29.32■■■□□ 2.28
HDAC11-206ENST00000405025 RARRES1P49788 294 aa29.32■■■□□ 2.28
HDAC11-206ENST00000405025 ECHDC2Q86YB7 292 aa29.32■■■□□ 2.28
HDAC11-206ENST00000405025 EXOC8Q8IYI6 725 aa29.32■■■□□ 2.28
HDAC11-206ENST00000405025 MRPL38Q96DV4 380 aaKnown RBP29.32■■■□□ 2.28
HDAC11-206ENST00000405025 ATP6V0A4Q9HBG4 840 aa29.32■■■□□ 2.28
HDAC11-206ENST00000405025 TUFT1Q9NNX1 390 aa29.32■■■□□ 2.28
HDAC11-206ENST00000405025 RWDD3Q9Y3V2 267 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms