RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 SNX17Q15036 470 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 LRRC41Q15345 812 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 C9orf50Q5SZB4 431 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 TMEM179Q6ZVK1 233 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 UBE3DQ7Z6J8 389 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 AMOTL1Q8IY63 956 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 TRPV1Q8NER1 839 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 FERMT2Q96AC1 680 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 FBRSQ9HAH7 460 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 XPNPEP3Q9NQH7 507 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 CNPY2Q9Y2B0 182 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 PCDHB14Q9Y5E9 798 aa8.1□□□□□ -1.11
CEACAM1-208ENST00000403461 MGAMO43451 1857 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 GSC2O15499 205 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 PQBP1O60828 265 aaKnown RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 AKR1A1P14550 325 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 SHMT1P34896 483 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 KCTD2Q14681 263 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 SEPT2Q15019 361 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 FAM47AQ5JRC9 791 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 ANO1Q5XXA6 986 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 ERC1Q8IUD2 1116 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 FTSJ3Q8IY81 847 aaKnown RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 SSH3Q8TE77 659 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 NUP133Q8WUM0 1156 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 MMP19Q99542 508 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 CCDC8Q9H0W5 538 aaPredicted RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 CAPN10Q9HC96 672 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 MCM9Q9NXL9 1143 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 SWAP70Q9UH65 585 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 DBNLQ9UJU6 430 aaKnown RBP8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 MYH13Q9UKX3 1938 aa8.09□□□□□ -1.11
CEACAM1-208ENST00000403461 MYH2Q9UKX2 1941 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 TRIM43BA6NCK2 446 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 KIAA0355O15063 1070 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 COBLO75128 1261 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 BCAR3O75815 825 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 FSTP19883 344 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 ATP8B2P98198 1209 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 TLE2Q04725 743 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 ICA1Q05084 483 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 CLCQ05315 142 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 NKG7Q16617 165 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 ZKSCAN2Q63HK3 967 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 SLC6A19Q695T7 634 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 MCATQ8IVS2 390 aaKnown RBP8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 TRIM43Q96BQ3 446 aaPredicted RBP8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 ACSF2Q96CM8 615 aaPredicted RBP8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 MAML3Q96JK9 1138 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 TTYH1Q9H313 450 aaPredicted RBP8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 REV1Q9UBZ9 1251 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 COL6A3P12111 3177 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 A0A0C4DFX4 3053 aa8.08□□□□□ -1.12
CEACAM1-208ENST00000403461 MROH7Q68CQ1 1323 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 A0A1W2PQ45 241 aaPredicted RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 A0A1W2PQY0 241 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 WDR46O15213 610 aaKnown RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 LRIG2O94898 1065 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 SOX9P48436 509 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 PLCD1P51178 756 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 PRAMEF19Q5SWL8 479 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 SLC9C2Q5TAH2 1124 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 GK5Q6ZS86 529 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 ZAR1Q86SH2 424 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 AACSQ86V21 672 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 SPICE1Q8N0Z3 855 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 TMEM57Q8N5G2 664 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 GIMAP7Q8NHV1 300 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 GATA6Q92908 595 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 TIFAQ96CG3 184 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 SEC16BQ96JE7 1060 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 TMEM87BQ96K49 555 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 CCDC17Q96LX7 622 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 RIOK1Q9BRS2 568 aaKnown RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 TINF2Q9BSI4 451 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 FOXQ1Q9C009 403 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 MTIF3Q9H2K0 278 aaKnown RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 SPC25Q9HBM1 224 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 STARD7Q9NQZ5 370 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 NOP58Q9Y2X3 529 aaKnown RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 TMX2Q9Y320 296 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 CTDP1Q9Y5B0 961 aaPredicted RBP8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 PHIPQ8WWQ0 1821 aa8.07□□□□□ -1.12
CEACAM1-208ENST00000403461 PTPRFP10586 1907 aa8.06□□□□□ -1.12
CEACAM1-208ENST00000403461 A0A1W2PRG0 241 aa8.06□□□□□ -1.12
CEACAM1-208ENST00000403461 PGK1P00558 417 aa8.06□□□□□ -1.12
CEACAM1-208ENST00000403461 CST3P01034 146 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms