RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 EIF4BP23588 611 aaKnown RBP16.5■□□□□ 0.23
VAMP1-203ENST00000400911 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
VAMP1-203ENST00000400911 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
VAMP1-203ENST00000400911 CLLU1OSQ5K130 101 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 CES5AQ6NT32 575 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 ZNF746Q6NUN9 644 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-203ENST00000400911 LRRC71Q8N4P6 559 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-203ENST00000400911 MAP7D2Q96T17 732 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 ANO2Q9NQ90 1003 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-203ENST00000400911 CEP131Q9UPN4 1083 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 PCDHA10Q9Y5I2 948 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
VAMP1-203ENST00000400911 CLASP2O75122 1294 aaKnown RBP16.49■□□□□ 0.23
VAMP1-203ENST00000400911 CXCL14O95715 111 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 WEE2P0C1S8 567 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 CDC27P30260 824 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 CA8P35219 290 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 NUBP1P53384 320 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 ITIH3Q06033 890 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 MTMR3Q13615 1198 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 SMAP1Q8IYB5 467 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-203ENST00000400911 UBALD2Q8IYN6 164 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 SORCS3Q9UPU3 1222 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
VAMP1-203ENST00000400911 ZFHX2Q9C0A1 2572 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-203ENST00000400911 A0A0U1RQF3 1178 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 NT5C1B-RDH14C9J2C7 533 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-203ENST00000400911 ASGR2P07307 311 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 FGFR4P22455 802 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 TMOD1P28289 359 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 METAP2P50579 478 aaKnown RBP eCLIP16.48■□□□□ 0.23
VAMP1-203ENST00000400911 SETQ01105 290 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-203ENST00000400911 PRR16Q569H4 304 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 LINC01465Q8N7H1 131 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 C12orf76Q8N812 135 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-203ENST00000400911 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 NECTIN4Q96NY8 510 aa16.48■□□□□ 0.23
VAMP1-203ENST00000400911 KIAA1671Q9BY89 1806 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 CSDE1O75534 798 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 EOMESO95936 686 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 DARSP14868 501 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 ADD1P35611 737 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 ALDH7A1P49419 539 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 GPC3P51654 580 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 BCAR1P56945 870 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 DHX32Q7L7V1 743 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 ZNF598Q86UK7 904 aaKnown RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 TMEM105Q8N8V8 129 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 FAM167AQ96KS9 214 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 SCLT1Q96NL6 688 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 LIMD1Q9UGP4 676 aa16.47■□□□□ 0.23
VAMP1-203ENST00000400911 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
VAMP1-203ENST00000400911 ZDBF2Q9HCK1 2354 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 VPS13AQ96RL7 3174 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 PLXNA4Q9HCM2 1894 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 PROB1E7EW31 1015 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 ZNF862O60290 1169 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 MTHFRP42898 656 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 ASCL5Q7RTU5 278 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 VPS52Q8N1B4 723 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 ZNF710Q8N1W2 664 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 AUTS2Q8WXX7 1259 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 ZMYND12Q9H0C1 365 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 NRBP2Q9NSY0 501 aa16.46■□□□□ 0.23
VAMP1-203ENST00000400911 WDR64B1ANS9 1081 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 OATP04181 439 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 IRX6P78412 446 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-203ENST00000400911 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
VAMP1-203ENST00000400911 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 TMEM173Q86WV6 379 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-203ENST00000400911 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
VAMP1-203ENST00000400911 TMEM87AQ8NBN3 555 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 NLRP7Q8WX94 980 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 LENG9Q96B70 501 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 TMEM169Q96HH4 297 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 C6orf50Q9HD87 102 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 DISC1Q9NRI5 854 aa16.45■□□□□ 0.22
VAMP1-203ENST00000400911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.44■□□□□ 0.22
VAMP1-203ENST00000400911 ESYT2A0FGR8 921 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 EPCAMP16422 314 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 PRKCEQ02156 737 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 DRP2Q13474 957 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 LONRF3Q496Y0 759 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 ATAT1Q5SQI0 421 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 MCTP2Q6DN12 878 aa16.44■□□□□ 0.22
VAMP1-203ENST00000400911 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms